Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09] 1,923 sequences; 1,679,203,469 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq7 87.8 1e-12 >seq7 Length=74282399 Score = 87.8 bits (96), Expect = 1e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| ||||| ||||| ||||||||||||||||||||||| || || || |||||||||| Sbjct 71536952 CTTTGTATTCGGCTCCAAAATGCCTCCACTGAAATCCATAAACTGGACCCAGATCTCCTT 71536893 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | || | || || || ||||| | ||| ||| || || || |||||||||| Sbjct 71536892 CCTCCCGATCGGTGAATCCGTTCTTATCCAGAAACTCTCTGGAGCCGTTAGCATCCCAAA 71536833 Query 102153 T 102153 | Sbjct 71536832 T 71536832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361242733513673