Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09]
1,923 sequences; 1,679,203,469 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq1136 116 3e-21
seq5 113 4e-20
seq10 109 5e-19
>seq1136
Length=355867
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||| |||||||| || || ||||| ||||| | |||||| || | ||
Sbjct 320302 AGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 320243
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||||||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 320242 TCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 320183
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || |||| ||||| || | ||| ||||||
Sbjct 320182 TGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACCTCGAGGGTGATGGTC 320123
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || | ||||||||||| || |||||
Sbjct 320122 TTACCAGTAAGGGTTTTGACAAAGATCTGCAT 320091
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||| |||||||| || || ||||| ||||| | |||||| || | ||
Sbjct 320530 AGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 320471
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||||||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 320470 TCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCT 320411
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || || | ||||| || | ||| ||||||
Sbjct 320410 TGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTTATGGTC 320351
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || ||||| ||||| || |||||
Sbjct 320350 TTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 320319
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||| |||||||| || || ||||| ||||| | |||||| || | ||
Sbjct 321442 AGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 321383
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||||||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 321382 TCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCT 321323
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || || | ||||| || | ||| ||||||
Sbjct 321322 TGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTC 321263
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || ||||| ||||| || |||||
Sbjct 321262 TTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 321231
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| ||||| || | ||||| | |||||||| ||||| || || ||||| ||||| | |
Sbjct 321913 CCTCCTCGGAGACGCAGCACAAGGTGCAAAGTAGACTCTTTCTGGATGTTGTAGTCAGAC 321854
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| || | || || |||||||| || ||| | || | ||||||||||| |||
Sbjct 321853 AGGGTTCGGCCATCTTCTAGCTGTTTACCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 321794
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||| ||||| ||| || || || | | | || |||| |||||
Sbjct 321793 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACC 321734
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||| || || || ||||| ||||| || |||||
Sbjct 321733 TCGAGGGTGATGGTCTTTCCTGTCAAGGTTTTAACAAAAATCTGCAT 321687
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025
||||| |||||| |||||||| || || ||||| ||||| | |||||| || | || ||
Sbjct 320756 CACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTC 320697
Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085
||||||||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 320696 TAGCTGTTTGCCAGCAAAGATTAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCTTG 320637
Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145
||| || || || | | | || || | ||||| || | ||| ||||||||
Sbjct 320636 GATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTCTT 320577
Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || ||||| ||||| || |||||
Sbjct 320576 TCCTGTCAAGGTTTTTACAAAGATCTGCAT 320547
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||| |||||||| || || ||||| ||||| | |||||| || | ||
Sbjct 320986 AGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 320927
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||||||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 320926 TCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCT 320867
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || |||| ||||| || | ||| ||||||
Sbjct 320866 TGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACCTCGAGGGTGATGGTC 320807
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || || || || || || |||||
Sbjct 320806 TTTCCTGTCAAGGTCTTAACGAAGATCTGCAT 320775
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025
||||| |||||| |||||||| || || ||||| ||||| | |||||| || | || ||
Sbjct 293374 CACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTC 293315
Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085
||||||||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 293314 TAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTG 293255
Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145
||| || || || | | | || |||| ||||| || | ||| ||||||||
Sbjct 293254 GATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCAAGGGTGATGGTCTT 293195
Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || | || ||||| || || |||||
Sbjct 293194 ACCAGTAAGGGTCTTGACGAAGATCTGCAT 293165
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||| |||||||| || || ||||| ||||| | |||||| | | ||
Sbjct 293832 AGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 293773
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||||||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 293772 TCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 293713
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || |||| ||||| || | ||| ||||||
Sbjct 293712 TGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCAAGGGTGATGGTC 293653
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || | || ||||| || || |||||
Sbjct 293652 TTACCAGTAAGGGTCTTGACGAAGATCTGCAT 293621
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025
||||| |||||| |||||||| || || ||||| ||||| | |||||| || | || ||
Sbjct 294058 CACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTC 293999
Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085
||||||||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 293998 TAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTG 293939
Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145
||| || || || | | | || |||| ||||| || | ||| ||||||||
Sbjct 293938 GATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACCTCGAGGGTGATGGTCTT 293879
Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || || || || || |||||
Sbjct 293878 TCCTGTCAAGGTCTTTACGAAGATCTGCAT 293849
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025
||||| |||||| |||||||| || || ||||| ||||| | |||||| | | || ||
Sbjct 321212 CACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTC 321153
Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085
||||||||||| ||| |||| | |||||||||||| ||| | |||||| |||||
Sbjct 321152 TAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCTTG 321093
Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145
||| || || || | | | || || | ||||| || | || ||||||||
Sbjct 321092 GATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCTACCTCGAGAGTTATGGTCTT 321033
Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || || || || || |||||
Sbjct 321032 TCCTGTCAAGGTCTTAACGAAGATCTGCAT 321003
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||| |||||||| || || ||||| ||||| | |||||| || | ||
Sbjct 293604 AGCACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 293545
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| |||||||| || ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 293544 TCTAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCT 293485
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || || | ||||| || | ||| ||||||
Sbjct 293484 TGGATTTTGGCCTTGACGTTTTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTC 293425
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || || || || || || |||||
Sbjct 293424 TTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 293393
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025
||||| |||||| |||||||| || || ||||| ||||| | |||||| | | || ||
Sbjct 321668 CACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTC 321609
Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085
|||||||| || ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 321608 TAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTG 321549
Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145
||| || || || | | | || |||| ||||| || | || ||||||||
Sbjct 321548 GATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACCTCGAGAGTTATGGTCTT 321489
Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || || || || || |||||
Sbjct 321488 TCCTGTCAAGGTCTTAACGAAGATCTGCAT 321459
>seq5
Length=72500376
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||| |||||||| || || ||||| ||||| | |||||| || | ||
Sbjct 42094535 AGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 42094476
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||||||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 42094475 TCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCT 42094416
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || |||| ||||| || | ||| |||||
Sbjct 42094415 TGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACCTCGAGGGTGATGGTT 42094356
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || | ||||||||||| || |||||
Sbjct 42094355 TTACCAGTAAGGGTTTTGACAAAGATCTGCAT 42094324
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||| |||||||| || || ||||| ||||| | |||||| || | ||
Sbjct 42067614 AGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 42067555
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||||||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 42067554 TCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 42067495
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || |||| ||||| || | ||| ||||||
Sbjct 42067494 TGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCAAGGGTGATGGTC 42067435
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || | || ||||| || || |||||
Sbjct 42067434 TTACCAGTAAGGGTCTTGACGAAGATCTGCAT 42067403
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||| |||||||| || || ||||| ||||| | |||||| || | ||
Sbjct 42068070 AGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 42068011
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||||||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 42068010 TCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 42067951
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || |||| ||||| || | ||| ||||||
Sbjct 42067950 TGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCGAGGGTGATGGTC 42067891
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || || || || || || |||||
Sbjct 42067890 TTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 42067859
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||| |||||||| || || ||||| ||||| | |||||| | | ||
Sbjct 42094763 AGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 42094704
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||||||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 42094703 TCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 42094644
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || || | ||||| || | ||| ||||||
Sbjct 42094643 TGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTC 42094584
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || ||||| ||||| || |||||
Sbjct 42094583 TTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 42094552
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||| |||||||| || || ||||| ||||| | |||||| || | ||
Sbjct 42095219 AGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 42095160
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||||||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 42095159 TCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 42095100
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || || | ||||| || | ||| ||||||
Sbjct 42095099 TGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTC 42095040
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || || ||||| || || |||||
Sbjct 42095039 TTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 42095008
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||| |||||||| || || ||||| ||||| | ||||| || | ||
Sbjct 42095447 AGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGATAGGGTGCGGCCATCT 42095388
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||||||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 42095387 TCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCT 42095328
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || || | ||||| || | ||| ||||||
Sbjct 42095327 TGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTC 42095268
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || ||||| ||||| || |||||
Sbjct 42095267 TTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 42095236
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||| |||||||| || || ||||| ||||| | |||||| || | ||
Sbjct 42095903 AGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 42095844
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| |||||||| || ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 42095843 TCTAGCTGTTTACCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCT 42095784
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || |||| ||||| || | ||| ||||||
Sbjct 42095783 TGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCGACCTCAAGGGTGATGGTC 42095724
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || ||||| || || || |||||
Sbjct 42095723 TTTCCTGTCAAGGTTTTAACGAAAATCTGCAT 42095692
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025
||||| |||||| |||||||| || || ||||| ||||| | |||||| || | || ||
Sbjct 42067156 CACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTC 42067097
Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085
||||||||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 42067096 TAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTG 42067037
Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145
||| || || || | | | || |||| ||||| || | ||| ||||||||
Sbjct 42067036 GATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCAAGGGTGATGGTCTT 42066977
Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || | || ||||| || || |||||
Sbjct 42066976 ACCAGTAAGGGTCTTGACGAAGATCTGCAT 42066947
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||| |||||||| || || ||||| ||||| | |||||| || | ||
Sbjct 42094991 AGCACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 42094932
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| | |||||| || ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 42094931 TCTAACTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCT 42094872
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || || | ||||| || | ||| ||||||
Sbjct 42094871 TGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTC 42094812
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || ||||| ||||| || |||||
Sbjct 42094811 TTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 42094780
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025
||||| |||||| |||||||| || || ||||| ||||| | || ||| || | || ||
Sbjct 42068296 CACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTC 42068237
Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085
|||||||||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 42068236 CAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTG 42068177
Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145
||| || || || | | | || || | ||||| || | ||| ||||||||
Sbjct 42068176 GATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTCTT 42068117
Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || || || || || |||||
Sbjct 42068116 TCCTGTCAAGGTCTTTACGAAGATCTGCAT 42068087
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||| |||||||| || || ||||| ||||| | |||||| || | ||
Sbjct 42067386 AGCACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 42067327
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| |||||||| || ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 42067326 TCTAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCT 42067267
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || || || | | | || || | ||||| || | ||| ||||||
Sbjct 42067266 TGGATTTTGGCCTTGACGTTTTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTC 42067207
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || || || || || || |||||
Sbjct 42067206 TTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 42067175
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025
||||| |||||| |||||||| || || ||||| ||||| | ||||| || | || ||
Sbjct 42067840 CACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTC 42067781
Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085
||||| ||||| ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 42067780 TAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTG 42067721
Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145
||| || || || | | | || || | ||||| || | ||| ||||||||
Sbjct 42067720 GATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTCTT 42067661
Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || || || || || |||||
Sbjct 42067660 TCCTGTCAAGGTCTTTACGAAGATCTGCAT 42067631
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025
||||| |||||| |||||||| || || ||||| ||||| | |||||| | | || ||
Sbjct 42095673 CACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTC 42095614
Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085
|||||||| || ||| | || | ||||||||||| ||| | |||||| |||||
Sbjct 42095613 TAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTG 42095554
Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145
||| || || || | | | || |||| ||||| || | || ||||||||
Sbjct 42095553 GATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACCTCGAGAGTTATGGTCTT 42095494
Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || || || || || |||||
Sbjct 42095493 TCCTGTCAATGTCTTAACGAAGATCTGCAT 42095464
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| ||||| || | ||||| | |||||||| ||||| || || ||||| || || | |
Sbjct 42096146 CCTCCTCGGAGACGCAGCACAAGGTGCAAAGTAGACTCTTTCTGGATGTTGTAATCAGAC 42096087
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| || | || || |||||||| || ||| | || | ||||||||||| |||
Sbjct 42096086 AAGGTGCGGCCATCTTCTAGCTGTTTACCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42096027
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||| ||||| ||| || || || | | | || || | |||||
Sbjct 42096026 ATGCCTTCTTTGTCCTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACC 42095967
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||| || || || || ||||| || || |||||
Sbjct 42095966 TCAAGGGTGATGGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 42095920
>seq10
Length=45420867
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022
|||||||| || | ||||||||||| || ||||| ||||| | |||||| | | ||
Sbjct 44694378 GAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATC 44694319
Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082
|| ||||| ||||| || |||| || | ||||||||| || | ||| ||||||||
Sbjct 44694318 TTCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTC 44694259
Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142
||| ||| ||||| | | | ||||||| || ||| || | || |||||
Sbjct 44694258 CTGGATTTTTGCCTTCACATTCTCAATGGTATCACTTGGTTCCACCTCAAGAGTGATGGT 44694199
Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||| ||||| || ||||| || || |||||
Sbjct 44694198 CTTGCCAGTTAAGGTCTTGACGAAGATCTGCAT 44694166
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| ||| | ||||| | ||| | ||||||||||| || ||||||||||| | |
Sbjct 44694164 CCACCTCTCAGACGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGAC 44694105
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | | || || ||||| ||||| ||| | || || | ||||||||| ||
Sbjct 44694104 AGGGTGCGTCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCAGGTGGG 44694045
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| ||||| || ||||| |||||| | | | || |||| ||||||
Sbjct 44694044 ATGCCCTCCTTATCTTGAATCTTGGCTTTCACGTTCTCAATGGTGTCACTGGGCTCGACC 44693985
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || |||||||| || || | ||| || || || || |||||
Sbjct 44693984 TCAAGAGTGATGGTCTTACCAGTCAGCGTCTTCACGAAGATCTGCAT 44693938
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022
||| || | ||| | |||||||| || || ||||| ||||| | |||||| | | ||
Sbjct 44693694 GAGAACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATC 44693635
Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082
|| ||||||||||| ||| | || || | ||||||||| || | ||| ||||| ||
Sbjct 44693634 TTCAAGCTGTTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTATC 44693575
Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142
||||| |||||| | | | || |||| |||||| || | || |||||
Sbjct 44693574 TTGAATCTTGGCTTTCACGTTCTCAATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGT 44693515
Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || | || ||||| || || |||||
Sbjct 44693514 TTTTCCTGTCAGAGTCTTGACGAAGATCTGCAT 44693482
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022
|||||||| || | ||||||||||| || ||||||||||| | |||||| | | ||
Sbjct 44693922 GAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGACAGGGTGCGCCCATC 44693863
Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082
|| ||||| ||||| ||| | ||||| | ||||||||| || | ||| ||||| ||
Sbjct 44693862 TTCAAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTATC 44693803
Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142
|| || || || | | | || || | |||||| |||| || |||||
Sbjct 44693802 TTGAATTTTAGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCGACCTCCAAAGTGATGGT 44693743
Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || | ||| || || || || |||||
Sbjct 44693742 TTTTCCAGTCAGCGTCTTCACGAAGATCTGCAT 44693710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422249303695868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |