Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09]
1,923 sequences; 1,679,203,469 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq10 158 1e-33
seq5 116 3e-21
seq1136 113 4e-20
>seq10
Length=45420867
Score = 158 bits (174), Expect = 1e-33
Identities = 161/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||||| || |||||||| || |||||||| ||| || ||||| ||||||
Sbjct 44693235 CACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCCTC 44693176
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
| ||||||||||||| |||| ||||||||||| || ||||| ||||||||||| |||
Sbjct 44693175 TAACTGTTTTCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTATCTTG 44693116
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|||||| || || | || | |||||| || ||||||||||| ||| | || ||
Sbjct 44693115 AATTTTAGCCTTGACATTCTCAATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTT 44693056
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || ||||| ||||||||
Sbjct 44693055 ACCAGTCAGCGTCTTCACAAAGATCTGCAT 44693026
Score = 138 bits (152), Expect = 1e-27
Identities = 161/215 (75%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||| ||||| || |||||||| ||||||||||| ||| || ||||| |||
Sbjct 44693466 CAGCACCAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCATC 44693407
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| ||||| || ||||| |||| ||||||||||| || || || ||||||||||| ||
Sbjct 44693406 TTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTATC 44693347
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGACCTCGACGGTCACCG 118704
| |||||| || || | || | |||||| | || | || ||||| | || | |
Sbjct 44693346 TTGAATTTTAGCCTTGACGTTCTCAATGGTGTCGCTTGGT-TCCACCTCTAGAGTGATGG 44693288
Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
| ||||||||||| || || ||||| |||||||||
Sbjct 44693287 TCTTGCCGGTCAGCGTCTTCACAAAGATCTGCATG 44693253
Score = 132 bits (146), Expect = 4e-26
Identities = 155/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| || |||||||| || |||||||| ||| || ||||| ||| || |
Sbjct 44693689 CAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCAA 44693630
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
||||||| ||||| |||| ||||||||||| || || || ||||||||||| ||| ||
Sbjct 44693629 GCTGTTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTATCTTGAA 44693570
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || ||| || | || | |||||| || ||||||||| | || | ||||| |
Sbjct 44693569 TCTTGGCTTTCACGTTCTCAATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTTTTTC 44693510
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| |||||||| || || || ||||||||
Sbjct 44693509 CTGTCAGAGTCTTGACGAAGATCTGCAT 44693482
Score = 123 bits (136), Expect = 2e-23
Identities = 158/215 (73%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||| ||||| || ||||| || || |||||||| ||| || |||||| |||
Sbjct 44694606 CAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATC 44694547
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| ||||| || |||||| |||| ||||||||||| || || || ||||||||||| ||
Sbjct 44694546 TTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTATC 44694487
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGACCTCGACGGTCACCG 118704
||||| || || | || | |||||| | || | || ||||||| || | |
Sbjct 44694486 CTGGATTTTGGCCTTCACGTTCTCAATGGTGTCGCTTGGT-TCCACCTCGAGTGTGATGG 44694428
Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
| ||||| ||||| || || || || |||||||||
Sbjct 44694427 TCTTGCCAGTCAGCGTCTTGACGAAGATCTGCATG 44694393
Score = 120 bits (132), Expect = 3e-22
Identities = 153/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||||| || ||||| || || ||||| || || || |||||| ||| ||
Sbjct 44693919 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGACAGGGTGCGCCCATCTTC 44693860
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || || |||| ||||||||||| || || || ||||||||||| |||
Sbjct 44693859 AAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTATCTTG 44693800
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|||||| || || | || | |||||| || ||||||||| | || | |||||
Sbjct 44693799 AATTTTAGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCGACCTCCAAAGTGATGGTTTT 44693740
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| ||||| || || || || |||||||||
Sbjct 44693739 TCCAGTCAGCGTCTTCACGAAGATCTGCATG 44693709
Score = 105 bits (116), Expect = 6e-18
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| || ||||| || || ||||| || ||| || ||||| ||| || |
Sbjct 44694145 CAAGATGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGTGCGTCCATCTTCAA 44694086
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
|||| || || || |||| ||||||||||| || || || ||||||||||| ||| ||
Sbjct 44694085 GCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTATCTTGAA 44694026
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || ||| || | || | |||||| || ||||||||| | || | || || |
Sbjct 44694025 TCTTGGCTTTCACGTTCTCAATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTCTTAC 44693966
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| ||||| || || || || ||||||||
Sbjct 44693965 CAGTCAGCGTCTTCACGAAGATCTGCAT 44693938
Score = 104 bits (114), Expect = 2e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||||| || ||||| || || |||||||| ||| || ||||| ||| ||
Sbjct 44694375 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTC 44694316
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || |||||| | || ||||||||||| || || || ||||||||||||||
Sbjct 44694315 AAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTG 44694256
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGACCTCGACGGTCACCGTTT 118707
|||||| || || | || | ||| || | || | || ||||| | || | || |
Sbjct 44694255 GATTTTTGCCTTCACATTCTCAATGGTATCACTTGGT-TCCACCTCAAGAGTGATGGTCT 44694197
Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || | || || || || ||||||||
Sbjct 44694196 TGCCAGTTAAGGTCTTGACGAAGATCTGCAT 44694166
>seq5
Length=72500376
Score = 116 bits (128), Expect = 3e-21
Identities = 156/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||| || | ||| |||||||| || |||||||| ||| || ||||| |||
Sbjct 42094992 CAGCACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 42094933
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| | |||||||||||| |||| | | |||||| || || || ||||| || |||||
Sbjct 42094932 TTCTAACTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 42094873
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| ||||| || || | || | |||||| | ||| ||||||| ||| | ||
Sbjct 42094872 TTGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGT 42094813
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || |||| ||||||||||| ||||||||| ||
Sbjct 42094812 CTTTCCTGTCAAGGTTTTTACAAAGATCTGCATGCCT 42094776
Score = 113 bits (124), Expect = 4e-20
Identities = 155/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||| || | ||| |||||||| || |||||||| || || ||||| |||
Sbjct 42067387 CAGCACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATC 42067328
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| |||||||||||||| |||| | | |||||| || || || ||||| || |||||
Sbjct 42067327 TTCTAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 42067268
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| ||||| || || | ||| | |||||| | ||| ||||||| ||| | ||
Sbjct 42067267 TTGGATTTTGGCCTTGACGTTTTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGT 42067208
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || |||| || ||||| || ||||||||| ||
Sbjct 42067207 CTTTCCTGTCAAGGTCTTTACGAAGATCTGCATGCCT 42067171
Score = 107 bits (118), Expect = 2e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||| || | || |||||||| || |||||||| ||| || ||||| |||
Sbjct 42094764 CAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATC 42094705
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| |||||||| ||||| |||| | | |||||| || || || ||||| || |||||
Sbjct 42094704 TTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 42094645
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
||||| || || | || | |||||| | ||| ||||||| ||| | ||
Sbjct 42094644 CTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGT 42094585
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || |||| ||||||||||| ||||||||| ||
Sbjct 42094584 CTTTCCTGTCAAGGTTTTTACAAAGATCTGCATGCCT 42094548
Score = 104 bits (114), Expect = 2e-17
Identities = 153/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||| || | || |||||||| || |||||||| || | ||||| |||
Sbjct 42095448 CAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGATAGGGTGCGGCCATC 42095389
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| |||||||| ||||| |||| | | |||||| || || || ||||| || |||||
Sbjct 42095388 TTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 42095329
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| ||||| || || | || | |||||| | ||| ||||||| ||| | ||
Sbjct 42095328 TTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGT 42095269
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || |||| ||||||||||| ||||||||| ||
Sbjct 42095268 CTTTCCTGTCAAGGTTTTTACAAAGATCTGCATGCCT 42095232
Score = 104 bits (114), Expect = 2e-17
Identities = 153/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||| || | || |||||||| || |||||||| || || ||||| |||
Sbjct 42095904 CAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATC 42095845
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| |||||||| ||||| |||| | | |||||| || || || ||||| || |||||
Sbjct 42095844 TTCTAGCTGTTTACCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 42095785
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| ||||| || || | || | |||||| | ||||||||| | ||| | ||
Sbjct 42095784 TTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCGACCTCAAGGGTGATGGT 42095725
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || |||| ||||| || |||||||||||| ||
Sbjct 42095724 CTTTCCTGTCAAGGTTTTAACGAAAATCTGCATGCCT 42095688
Score = 98.7 bits (108), Expect = 9e-16
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|||||||| || | || |||||||| || |||||||| ||| || ||||| |||
Sbjct 42095676 CAACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATC 42095617
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| |||||||||||||| |||| | | |||||| || || || ||||| || |||||
Sbjct 42095616 TTCTAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 42095557
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
||||| || || | || | |||||| | ||| ||||||| || | ||
Sbjct 42095556 CTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACCTCGAGAGTTATGGT 42095497
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || |||| || || || || ||||||||| ||
Sbjct 42095496 CTTTCCTGTCAATGTCTTAACGAAGATCTGCATGCCT 42095460
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | | || ||| | ||| | ||||||||||| || ||||||||||| |
Sbjct 42096146 CCTCCTCGGAGACGCAGCACAAGGTGCAAAGTAGACTCTTTCTGGATGTTGTAATCAGAC 42096087
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||||| ||| || |||||||| ||||| |||| | | |||||| || || ||
Sbjct 42096086 AAGGTGCGGCCATCTTCTAGCTGTTTACCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42096027
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
||||| || ||||| ||||| || || | || | |||||| | ||| |||
Sbjct 42096026 ATGCCTTCTTTGTCCTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACC 42095967
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| | ||| | || || || |||| || || || || ||||||||| ||
Sbjct 42095966 TCAAGGGTGATGGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCATGCCT 42095916
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||| || | || |||||||| || |||||||| || || ||||| |||
Sbjct 42068071 CAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATC 42068012
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| |||||||| || || |||| | | |||||| || || || ||||| || |||||
Sbjct 42068011 TTCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 42067952
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
||||| || || | || | |||||| | ||||||||||| ||| | ||
Sbjct 42067951 CTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCGAGGGTGATGGT 42067892
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || |||| || ||||| || ||||||||| ||
Sbjct 42067891 CTTTCCTGTCAAGGTCTTTACGAAGATCTGCATGCCT 42067855
>seq1136
Length=355867
Score = 113 bits (124), Expect = 4e-20
Identities = 155/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||| || | ||| |||||||| || |||||||| || || ||||| |||
Sbjct 293605 CAGCACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATC 293546
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| |||||||||||||| |||| | | |||||| || || || ||||| || |||||
Sbjct 293545 TTCTAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 293486
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| ||||| || || | ||| | |||||| | ||| ||||||| ||| | ||
Sbjct 293485 TTGGATTTTGGCCTTGACGTTTTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGT 293426
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || |||| || ||||| || ||||||||| ||
Sbjct 293425 CTTTCCTGTCAAGGTCTTTACGAAGATCTGCATGCCT 293389
Score = 113 bits (124), Expect = 4e-20
Identities = 155/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||| || | || |||||||| || |||||||| ||| || ||||| |||
Sbjct 320531 CAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 320472
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| |||||||| ||||| |||| | | |||||| || || || ||||| || |||||
Sbjct 320471 TTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 320412
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| ||||| || || | || | |||||| | ||| ||||||| ||| | ||
Sbjct 320411 TTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTTATGGT 320352
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || |||| ||||||||||| ||||||||| ||
Sbjct 320351 CTTTCCTGTCAAGGTTTTTACAAAGATCTGCATGCCT 320315
Score = 113 bits (124), Expect = 4e-20
Identities = 155/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|||||||| || | || |||||||| || |||||||| || || ||||| |||
Sbjct 320759 CAACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATC 320700
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| |||||||| ||||| |||| | | |||||| || || || ||||| || |||||
Sbjct 320699 TTCTAGCTGTTTGCCAGCAAAGATTAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 320640
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| ||||| || || | || | |||||| | ||| ||||||| ||| | ||
Sbjct 320639 TTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGT 320580
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || |||| ||||||||||| ||||||||| ||
Sbjct 320579 CTTTCCTGTCAAGGTTTTTACAAAGATCTGCATGCCT 320543
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | | || ||| | ||| | ||||||||||| || |||||||| || |
Sbjct 321913 CCTCCTCGGAGACGCAGCACAAGGTGCAAAGTAGACTCTTTCTGGATGTTGTAGTCAGAC 321854
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| || || ||| || |||||||| ||||| |||| | | |||||| || || ||
Sbjct 321853 AGGGTTCGGCCATCTTCTAGCTGTTTACCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 321794
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
||||| || |||||| ||||| || || | || | |||||| | ||| |||
Sbjct 321793 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACC 321734
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|||| ||| | || || || |||| ||||| ||||||||||||||| ||
Sbjct 321733 TCGAGGGTGATGGTCTTTCCTGTCAAGGTTTTAACAAAAATCTGCATGCCT 321683
Score = 104 bits (114), Expect = 2e-17
Identities = 153/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||| || | || |||||||| || |||||||| || || ||||| |||
Sbjct 321443 CAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATC 321384
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| |||||||| || || |||| | | |||||| || || || ||||| || |||||
Sbjct 321383 TTCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 321324
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| ||||| || || | || | |||||| | ||| ||||||| ||| | ||
Sbjct 321323 TTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGT 321264
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || |||| ||||||||||| ||||||||| ||
Sbjct 321263 CTTTCCTGTCAAGGTTTTTACAAAGATCTGCATGCCT 321227
Score = 98.7 bits (108), Expect = 9e-16
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|||||||| || | || |||||||| || |||||||| ||| || ||||| |||
Sbjct 321671 CAACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATC 321612
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| |||||||||||||| |||| | | |||||| || || || ||||| || |||||
Sbjct 321611 TTCTAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 321552
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
||||| || || | || | |||||| | ||| ||||||| || | ||
Sbjct 321551 CTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACCTCGAGAGTTATGGT 321492
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || |||| || || || || ||||||||| ||
Sbjct 321491 CTTTCCTGTCAAGGTCTTAACGAAGATCTGCATGCCT 321455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433820232506716
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |