Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09]
1,923 sequences; 1,679,203,469 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq10 122 7e-23
seq1136 100 2e-16
seq5 100 2e-16
>seq10
Length=45420867
Score = 122 bits (134), Expect = 7e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||| ||||| |||||||||||| ||| ||| | || ||
Sbjct 44693234 ACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCCTCT 44693175
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| |||||||| ||||| |||| ||||| ||||| ||||| | |||||||| || |
Sbjct 44693174 AACTGTTTTCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTATCTTGA 44693115
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | | |||| | ||| ||||| | ||| || |||||
Sbjct 44693114 ATTTTAGCCTTGACATTCTCAATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTA 44693055
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339
|| ||||| |||||||||||||| ||||| ||
Sbjct 44693054 CCAGTCAGCGTCTTCACAAAGATCTGCATCTT 44693023
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|| ||||||| | | |||| ||| || ||| ||| |||||||||||||||||| |
Sbjct 44693480 CCGCCTCTCAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAGTCGGAC 44693421
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| ||| | || || || || || || || || |||| ||||| ||||| || ||
Sbjct 44693420 AGGGTGCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGTGGG 44693361
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| |||||||| || |||||| ||| || | | | | |||| | ||||||
Sbjct 44693360 ATGCCCTCCTTATCTTGAATTTTAGCCTTGACGTTCTCAATGGTGTCGCTTGGTTCCACC 44693301
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| | || || |||||||| ||||| |||||||||||||| ||||||
Sbjct 44693300 TCTAGAGTGATGGTCTTGCCGGTCAGCGTCTTCACAAAGATCTGCATG 44693253
Score = 109 bits (120), Expect = 4e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| |||||||||||| ||| ||| | || ||
Sbjct 44694602 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCA 44694543
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| |||| ||||| ||||| || || | |||||||| |||
Sbjct 44694542 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTATCCTGG 44694483
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | | |||| | |||||||| | || || ||||||
Sbjct 44694482 ATTTTGGCCTTCACGTTCTCAATGGTGTCGCTTGGTTCCACCTCGAGTGTGATGGTCTTG 44694423
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| ||||| ||||| || ||||| ||||||
Sbjct 44694422 CCAGTCAGCGTCTTGACGAAGATCTGCATG 44694393
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| |||||||||||| ||| ||| | || ||
Sbjct 44694374 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCA 44694315
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| |||| ||||| ||||| || || | ||||||||||||
Sbjct 44694314 AGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGG 44694255
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|||||| ||| || | | | | | || | |||||||| | || || ||||||
Sbjct 44694254 ATTTTTGCCTTCACATTCTCAATGGTATCACTTGGTTCCACCTCAAGAGTGATGGTCTTG 44694195
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || | ||||| || ||||| |||||
Sbjct 44694194 CCAGTTAAGGTCTTGACGAAGATCTGCAT 44694166
Score = 84.2 bits (92), Expect = 2e-11
Identities = 149/216 (69%), Gaps = 1/216 (0%)
Strand=Plus/Minus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||| ||||| |||||||||||| ||| ||| | || || |
Sbjct 44693689 CAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCAA 44693630
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| ||||| || || || |||| ||||| ||||| || || | |||||||| || ||
Sbjct 44693629 GCTGTTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTATCTTGAA 44693570
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || || || | | | | |||| | ||| ||||| | || || || || |
Sbjct 44693569 TCTTGGCTTTCACGTTCTCAATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTTTTTC 44693510
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCTC 45344
| ||||||||||| || ||||| ||||| |||||
Sbjct 44693509 CTGTCAGAGTCTTGACGAAGATCTGCATACCGCCTC 44693474
>seq1136
Length=355867
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||| ||| ||| ||||| |||||||||||| ||| ||| | || ||
Sbjct 293829 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCT 293770
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| ||||| || ||||||| ||| ||||| || || | || || ||||||
Sbjct 293769 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGG 293710
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | | |||| | ||| ||||| | ||| || |||||
Sbjct 293709 ATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCAAGGGTGATGGTCTTA 293650
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| || || ||||| || ||||| ||||||
Sbjct 293649 CCAGTAAGGGTCTTGACGAAGATCTGCATG 293620
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||| |||| ||| ||| ||||| |||||||||||| ||| ||| | ||
Sbjct 293376 AACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 293317
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || ||||| ||||| || ||||||| ||| ||||| || || | || || ||||||
Sbjct 293316 TCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 293257
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||||| ||| || | | | | |||| | ||| ||||| | ||| || |||
Sbjct 293256 TGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCAAGGGTGATGGTC 293197
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || || ||||| || ||||| |||||
Sbjct 293196 TTACCAGTAAGGGTCTTGACGAAGATCTGCAT 293165
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||| | | || |||| |||| ||| ||| ||||| ||||||||||| |
Sbjct 294075 CCACCTCTGAGACGCAACACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAGAC 294016
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| ||| | || || || ||||| || || || ||||||| ||| ||||| || ||
Sbjct 294015 AGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 293956
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| || || |||||| ||||| ||| || | | | | |||| | ||| |||
Sbjct 293955 ATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACC 293896
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| | ||| || ||||| || |||| ||||| || ||||| ||||||
Sbjct 293895 TCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTTACGAAGATCTGCATG 293848
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||| |||| ||| ||| ||||| |||||||||||| ||| ||| | ||
Sbjct 321670 AACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 321611
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || |||||||| || || ||||||| ||| ||||| || || | || || ||||||
Sbjct 321610 TCTAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 321551
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||||| ||| || | | | | |||| | ||| ||||| | || || |||
Sbjct 321550 TGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACCTCGAGAGTTATGGTC 321491
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| || |||| ||||| || ||||| ||||||
Sbjct 321490 TTTCCTGTCAAGGTCTTAACGAAGATCTGCATG 321458
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||| ||| ||| ||||| |||||||||||| ||| ||| | || ||
Sbjct 320299 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCT 320240
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| || || || ||||||| ||| ||||| || || | || || ||||||
Sbjct 320239 AGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGG 320180
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | | |||| | ||| ||||| | ||| || |||||
Sbjct 320179 ATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACCTCGAGGGTGATGGTCTTA 320120
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || || || |||||||| |||||
Sbjct 320119 CCAGTAAGGGTTTTGACAAAGATCTGCAT 320091
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||| ||| ||| ||||| |||||||||||| ||| ||| | || ||
Sbjct 320527 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCT 320468
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| || || || ||||||| ||| ||||| || || | || || |||||
Sbjct 320467 AGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCTTGG 320408
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | | |||| | ||| ||||| | ||| || |||||
Sbjct 320407 ATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTTATGGTCTTT 320348
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| |||| || || |||||||| ||||||
Sbjct 320347 CCTGTCAAGGTTTTTACAAAGATCTGCATG 320318
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||| ||| ||| ||||| ||||||||||| ||| ||| | || ||
Sbjct 321439 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCT 321380
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| ||||| || ||||||| ||| ||||| || || | || || |||||
Sbjct 321379 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCTTGG 321320
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | | |||| | ||| ||||| | ||| || |||||
Sbjct 321319 ATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTCTTT 321260
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| |||| || || |||||||| ||||||
Sbjct 321259 CCTGTCAAGGTTTTTACAAAGATCTGCATG 321230
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||| ||| ||| ||||| ||||||||||| ||| ||| | || ||
Sbjct 320983 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCT 320924
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| ||||| || ||||||| ||| ||||| || || | || || |||||
Sbjct 320923 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCTTGG 320864
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | | |||| | ||| ||||| | ||| || |||||
Sbjct 320863 ATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACCTCGAGGGTGATGGTCTTT 320804
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| |||| ||||| || ||||| |||||
Sbjct 320803 CCTGTCAAGGTCTTAACGAAGATCTGCAT 320775
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||| ||| ||| ||||| ||||||||||| ||| ||| | || ||
Sbjct 293601 ACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCT 293542
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| |||||||| || || ||||||| ||| ||||| || || | || || |||||
Sbjct 293541 AGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCTTGG 293482
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | |||| | ||| ||||| | ||| || |||||
Sbjct 293481 ATTTTGGCCTTGACGTTTTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTCTTT 293422
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| |||| ||||| || ||||| ||||||
Sbjct 293421 CCTGTCAAGGTCTTTACGAAGATCTGCATG 293392
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||| |||| ||| ||| ||||| ||||||||||| ||| ||| | ||
Sbjct 320758 AACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 320699
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || ||||| || || || || |||| ||| ||||| || || | || || |||||
Sbjct 320698 TCTAGCTGTTTGCCAGCAAAGATTAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCT 320639
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||||| ||| || | | | | |||| | ||| ||||| | ||| || |||
Sbjct 320638 TGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTC 320579
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| || |||| || || |||||||| ||||||
Sbjct 320578 TTTCCTGTCAAGGTTTTTACAAAGATCTGCATG 320546
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||| |||| ||| ||| ||||| |||||||||||| ||| ||| | ||
Sbjct 321214 AACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 321155
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || ||||| || || || ||||| | ||| ||||| || || | || || |||||
Sbjct 321154 TCTAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCT 321095
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||||| ||| || | | | | |||| | ||| ||||| | || || |||
Sbjct 321094 TGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCTACCTCGAGAGTTATGGTC 321035
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| || |||| ||||| || ||||| ||||||
Sbjct 321034 TTTCCTGTCAAGGTCTTAACGAAGATCTGCATG 321002
>seq5
Length=72500376
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||| ||| ||| ||||| |||||||||||| ||| ||| | || ||
Sbjct 42067611 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCT 42067552
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| ||||| || ||||||| ||| ||||| || || | || || ||||||
Sbjct 42067551 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGG 42067492
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | | |||| | ||| ||||| | ||| || |||||
Sbjct 42067491 ATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCAAGGGTGATGGTCTTA 42067432
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| || || ||||| || ||||| ||||||
Sbjct 42067431 CCAGTAAGGGTCTTGACGAAGATCTGCATG 42067402
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||| |||| ||| ||| ||||| |||||||||||| ||| ||| | ||
Sbjct 42067158 AACACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 42067099
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || ||||| ||||| || ||||||| ||| ||||| || || | || || ||||||
Sbjct 42067098 TCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 42067039
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||||| ||| || | | | | |||| | ||| ||||| | ||| || |||
Sbjct 42067038 TGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCAAGGGTGATGGTC 42066979
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || || ||||| || ||||| |||||
Sbjct 42066978 TTACCAGTAAGGGTCTTGACGAAGATCTGCAT 42066947
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||| | | || |||| |||| ||| ||| ||||| ||||||||||| |
Sbjct 42068313 CCACCTCTGAGACGCAACACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAGAC 42068254
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
| ||| | || ||||| ||||| || || || ||||||| ||| ||||| || ||
Sbjct 42068253 AAGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42068194
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| || || |||||| ||||| ||| || | | | | |||| | ||| |||
Sbjct 42068193 ATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCTACC 42068134
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| | ||| || ||||| || |||| ||||| || ||||| ||||||
Sbjct 42068133 TCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTTACGAAGATCTGCATG 42068086
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||| |||| ||| ||| ||||| |||||||||||| ||| ||| | ||
Sbjct 42095675 AACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 42095616
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || |||||||| || || ||||||| ||| ||||| || || | || || ||||||
Sbjct 42095615 TCTAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 42095556
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||||| ||| || | | | | |||| | ||| ||||| | || || |||
Sbjct 42095555 TGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACCTCGAGAGTTATGGTC 42095496
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| || |||| ||||| || ||||| ||||||
Sbjct 42095495 TTTCCTGTCAATGTCTTAACGAAGATCTGCATG 42095463
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||| ||| ||| ||||| ||||||||||| ||| ||| | || ||
Sbjct 42068067 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCT 42068008
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| ||||| || ||||||| ||| ||||| || || | || || ||||||
Sbjct 42068007 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGG 42067948
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | | |||| | ||| ||||| | ||| || |||||
Sbjct 42067947 ATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCGAGGGTGATGGTCTTT 42067888
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| |||| ||||| || ||||| ||||||
Sbjct 42067887 CCTGTCAAGGTCTTTACGAAGATCTGCATG 42067858
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||| ||| ||| ||||| |||||||||||| ||| ||| | || ||
Sbjct 42094760 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCT 42094701
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| || || || ||||||| ||| ||||| || || | || || ||||||
Sbjct 42094700 AGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGG 42094641
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | | |||| | ||| ||||| | ||| || |||||
Sbjct 42094640 ATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTCTTT 42094581
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| |||| || || |||||||| ||||||
Sbjct 42094580 CCTGTCAAGGTTTTTACAAAGATCTGCATG 42094551
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||| ||| ||| ||||| |||||||||||| ||| ||| | || ||
Sbjct 42095216 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCT 42095157
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| || || || ||||||| ||| ||||| || || | || || ||||||
Sbjct 42095156 AGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGG 42095097
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | | |||| | ||| ||||| | ||| || |||||
Sbjct 42095096 ATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTCTTT 42095037
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| |||| ||||| || ||||| ||||||
Sbjct 42095036 CCTGTCAAGGTCTTGACGAAGATCTGCATG 42095007
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||| |||| ||| ||| ||||| |||||||||||| || ||| | ||
Sbjct 42067842 AACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 42067783
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || || || ||||| || ||||||| ||| ||||| || || | || || ||||||
Sbjct 42067782 TCTAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 42067723
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||||| ||| || | | | | |||| | ||| ||||| | ||| || |||
Sbjct 42067722 TGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTC 42067663
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| || |||| ||||| || ||||| ||||||
Sbjct 42067662 TTTCCTGTCAAGGTCTTTACGAAGATCTGCATG 42067630
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||| ||| ||| ||||| |||||||||||| ||| ||| | || ||
Sbjct 42094988 ACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCT 42094929
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| |||||||| || || ||||||| ||| ||||| || || | || || |||||
Sbjct 42094928 AACTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCTTGG 42094869
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | | |||| | ||| ||||| | ||| || |||||
Sbjct 42094868 ATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTCTTT 42094809
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| |||| || || |||||||| ||||||
Sbjct 42094808 CCTGTCAAGGTTTTTACAAAGATCTGCATG 42094779
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||| ||| ||| ||||| ||||||||||| ||| ||| | || ||
Sbjct 42067383 ACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCT 42067324
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| |||||||| || || ||||||| ||| ||||| || || | || || |||||
Sbjct 42067323 AGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCTTGG 42067264
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | |||| | ||| ||||| | ||| || |||||
Sbjct 42067263 ATTTTGGCCTTGACGTTTTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTCTTT 42067204
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| |||| ||||| || ||||| ||||||
Sbjct 42067203 CCTGTCAAGGTCTTTACGAAGATCTGCATG 42067174
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||| ||| ||| ||||| |||||||||||| ||| ||| | || ||
Sbjct 42094532 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCT 42094473
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| || || || ||||||| ||| ||||| || || | || || |||||
Sbjct 42094472 AGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCTTGG 42094413
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | | |||| | ||| ||||| | ||| || || ||
Sbjct 42094412 ATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACCTCGAGGGTGATGGTTTTA 42094353
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || || || |||||||| |||||
Sbjct 42094352 CCAGTAAGGGTTTTGACAAAGATCTGCAT 42094324
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||| ||| ||| ||||| ||||||||||| || ||| | || ||
Sbjct 42095444 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGATAGGGTGCGGCCATCTTCT 42095385
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| || || || ||||||| ||| ||||| || || | || || |||||
Sbjct 42095384 AGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCTTGG 42095325
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | | |||| | ||| ||||| | ||| || |||||
Sbjct 42095324 ATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTCTTT 42095265
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| |||| || || |||||||| ||||||
Sbjct 42095264 CCTGTCAAGGTTTTTACAAAGATCTGCATG 42095235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395065940795383
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |