Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09] 1,923 sequences; 1,679,203,469 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq10 113 4e-20 seq21 102 7e-17 seq5 100 3e-16 seq1136 96.9 3e-15 seq1589 82.4 7e-11 seq19 82.4 7e-11 >seq10 Length=45420867 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| ||||| ||||| || ||||| | || || ||||| Sbjct 44693253 CATGCAGATCTTTGTGAAGACGCTGACCGGCAAGACCATCACTCTAGAGGTGGAACCAAG 44693312 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | ||| || ||||| ||| | || || ||||| Sbjct 44693313 CGACACCATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGCATCCCACCTGACCA 44693372 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||||||||| || || |||||||| ||| | ||||| | | | || || ||| || | Sbjct 44693373 GCAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAAGA-TGGACGCACCCTGTCCGACTACA 44693431 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||| ||||| || || || || ||||| || | ||||| ||||||| Sbjct 44693432 ACATTCAGAAAGAGTCCACCCTCCACCTGGTGCTGCGTCTGAGAGGCGGTA 44693482 Score = 109 bits (120), Expect = 5e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| || ||||| |||| || ||||| Sbjct 44694393 CATGCAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACACTCGAGGTGGAACCAAG 44694452 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | || || | ||| ||| ||||| ||| | || || ||||| Sbjct 44694453 CGACACCATTGAGAACGTGAAGGCCAAAATCCAGGATAAGGAGGGCATCCCACCTGACCA 44694512 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||||||||| || ||||||||||| ||| | ||||| | | | ||| || ||| || | Sbjct 44694513 GCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGA-TGGACGCACTCTGTCCGACTACA 44694571 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| || || || || || || || ||||| || Sbjct 44694572 ACATCCAGAAGGAGTCCACCCTCCACCTGGTGCT 44694605 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||||||||| ||||| ||||| | || || || || Sbjct 44693482 ATGCAGATCTTCGTCAAGACTCTGACAGGAAAAACCATCACTCTTGAGGTCGAGCCCAGT 44693541 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| | || || ||||| ||| | || || |||||| Sbjct 44693542 GACACCATTGAGAACGTGAAAGCCAAGATTCAAGATAAGGAGGGCATCCCACCTGACCAG 44693601 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || || |||||||||||| | ||||| | | | || || ||| || || Sbjct 44693602 CAGCGTCTGATCTTTGCTGGCAAACAGCTTGAAGA-TGGACGCACCCTGTCCGACTACAA 44693660 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || ||||| || || || ||||| || || | || |||||||| Sbjct 44693661 CATCCAGAAAGAGTCCACCCTCCATCTTGTTCTCCGCCTCAGGGGCGG 44693708 Score = 105 bits (116), Expect = 6e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || || || ||||| ||||| || || || |||||| |||| || || || Sbjct 44693022 AAAGATGCAGATCTTTGTGAAGACGCTGACTGGTAAGACCATCACCCTCGAGGTCGAGCC 44693081 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||| | || | ||||| | ||| || ||||| ||| | || || || Sbjct 44693082 CAGCGACACCATTGAGAATGTCAAGGCTAAAATTCAAGATAAGGAGGGCATTCCTCCTGA 44693141 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATT 31367 |||||||||||| || |||||||| |||||||| || || | | | || || ||| | Sbjct 44693142 CCAGCAGCGTCTGATCTTCGCTGGAAAACAGTTAGAGGA-TGGACGCACCCTGTCCGACT 44693200 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 | ||||| || ||||| || || || || ||||| || | || ||||| || Sbjct 44693201 ACAACATCCAGAAAGAGTCCACCCTCCACCTGGTGCTCCGCCTCAGGGGTGG 44693252 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| | || ||||| || ||||| | || || ||||| Sbjct 44694166 ATGCAGATCTTCGTCAAGACCTTAACTGGCAAGACCATCACTCTTGAGGTGGAACCAAGT 44694225 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || || | ||| ||||||||| ||| | || || |||||| Sbjct 44694226 GATACCATTGAGAATGTGAAGGCAAAAATCCAGGACAAGGAGGGCATCCCACCTGACCAG 44694285 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || ||||||||||| ||| | ||||| | | | || || ||| || || Sbjct 44694286 CAGCGTCTGATTTTCGCTGGCAAGCAGCTTGAAGA-TGGACGCACCCTGTCCGACTACAA 44694344 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || || || || || ||||| || | || |||||||| Sbjct 44694345 CATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTCAGGGGCGG 44694392 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| || ||||| ||||| | || || || || Sbjct 44693709 CATGCAGATCTTCGTGAAGACGCTGACTGGAAAAACCATCACTTTGGAGGTCGAGCCCAG 44693768 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | ||| || ||||| ||| | || || ||||| Sbjct 44693769 CGACACCATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGCATCCCACCTGACCA 44693828 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || || ||||| ||| | ||||| || || || ||||| Sbjct 44693829 GCAGCGTCTTATCTTTGCCGGCAAGCAGCTTGAAGATGGGCGCACCCTGTCTGACTATAA 44693888 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || || || ||||| || | || ||||| |||| Sbjct 44693889 CATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTCAGGGGTGGTA 44693938 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| ||||| || || || ||||| | || || || || Sbjct 44693938 ATGCAGATCTTCGTGAAGACGCTGACTGGTAAGACCATCACTCTTGAGGTCGAGCCCAGT 44693997 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| | || || ||||| ||| | || || |||||| Sbjct 44693998 GACACCATTGAGAACGTGAAAGCCAAGATTCAAGATAAGGAGGGCATCCCACCTGACCAG 44694057 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || || || ||||| ||| | ||||| | | | || || ||| ||||| Sbjct 44694058 CAGCGTCTGATCTTTGCCGGCAAGCAGCTTGAAGA-TGGACGCACCCTGTCCGACTATAA 44694116 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || || ||||| || || | ||||| || |||| Sbjct 44694117 CATCCAGAAGGAGTCCACCCTCCATCTTGTGCTGCGTCTGAGAGGTGGTA 44694166 >seq21 Length=45934066 Score = 102 bits (112), Expect = 7e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 23063 GTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGG 23122 |||||||| ||||| || || || | |||||| || || || ||||||| || |||| Sbjct 30778854 GTGTACTCAACAATCTCTGTGCACAAATTGCTGCATTTGATGGTGCCCAGGTTCTGCTGG 30778913 Query 23123 TTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGC 23182 ||||| || || ||||| | || ||||| |||||||| || ||||| ||||| ||| Sbjct 30778914 TTGCTCTTGCGGTTGCAGGCGTCTTTGTAAAGCATGTATGGTGTGCCGGTCTCAGTCTGA 30778973 Query 23183 GACTCGATGATCGC 23196 ||||||||||| || Sbjct 30778974 GACTCGATGATGGC 30778987 Score = 102 bits (112), Expect = 7e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| || ||||| || ||||| || ||||| ||||| || | ||| | | |||||||| Sbjct 30779643 TCATGAAGAGATCAGGAATCCAGAGGGCGTAAAACAGATCTCTGGCTCTCTGCTCCTCTT 30779702 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 | || ||||||||||| | || | ||||| || | ||| |||||| ||||| |||| Sbjct 30779703 TACCAGTGTTCTTTTTAAGCTCTAGGAAGTCGAAAATGTCAAAATGCCAAGGCTCCAGGT 30779762 Query 23472 AAACGGCAAACGCGCCCGGTCTCT 23495 | | |||||| || || ||||||| Sbjct 30779763 ACATGGCAAAAGCTCCTGGTCTCT 30779786 >seq5 Length=72500376 Score = 100 bits (110), Expect = 3e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||||||||| ||||||| || || |||||| |||| || || || Sbjct 42068086 CATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 42068145 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | ||| |||||| |||||| | || || ||||| Sbjct 42068146 CGACACCATTGAGAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 42068205 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || |||||||||||| ||||||| || || || || || Sbjct 42068206 GCAGAGGTTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCTTGTCTGACTACAA 42068265 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTAGAA 31424 ||| || ||||| || || | |||||||| | | || || || |||| || Sbjct 42068266 CATCCAGAAAGAGTCCACATTGCATCTGGTGTTGCGTCTCAGAGGTGGTACAA 42068318 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||||||||| ||||||| || || |||||| |||| || || || Sbjct 42067174 CATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 42067233 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | |||| ||||| | ||| ||||| |||||| | || || ||||| Sbjct 42067234 CGACACCATTGAAAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCA 42067293 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || ||||| |||||| | ||||| || || || || || Sbjct 42067294 GCAGAGGTTGATCTTTGCTGGAAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAA 42067353 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || ||||| || || | |||||||| || | || ||||| || Sbjct 42067354 CATCCAGAAAGAGTCCACATTGCATCTGGTGCTGCGTCTCAGGGGAGG 42067401 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||||| || || |||||| |||| || || || Sbjct 42095007 CATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 42095066 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | ||| |||||| |||||| | || || ||||| Sbjct 42095067 CGACACCATTGAGAATGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 42095126 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || |||||||||||| | ||||| || || ||| || || Sbjct 42095127 GCAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTGTCCGACTACAA 42095186 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || ||||| || || | |||||||| || Sbjct 42095187 CATCCAGAAAGAGTCCACCTTGCATCTGGTGCT 42095219 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || ||||| || ||||||| || || |||||| |||| || || || Sbjct 42094551 CATGCAGATCTTTGTAAAAACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 42094610 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | ||| |||||| |||||| | || || ||||| Sbjct 42094611 CGACACCATTGAGAATGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 42094670 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 |||| | | || || |||||||||||| | ||||| | | | || || ||| || | Sbjct 42094671 GCAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGA-TGGACGCACCCTGTCCGACTACA 42094729 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| || ||||| || || | |||||||| || Sbjct 42094730 ACATCCAGAAAGAGTCCACCTTGCATCTGGTGCT 42094763 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||||||||| ||||||| || || |||||| |||| || || || Sbjct 42067858 CATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTCGAGCCAAG 42067917 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | ||||| | ||| |||||| |||||| | || || ||||| Sbjct 42067918 TGACACCATTGAGAATGTCAAGGCTAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 42067977 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || || ||||||||| | ||||| || || || || || Sbjct 42067978 GCAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAA 42068037 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || ||||| || || | |||||||| || | || ||||| || Sbjct 42068038 CATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTCAGGGGAGG 42068085 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||||||||| ||||||| || || |||||| |||| || || || Sbjct 42067630 CATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 42067689 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | ||| |||||| |||||| | || || ||||| Sbjct 42067690 CGACACCATTGAGAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 42067749 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || || ||||| ||| | ||||| || | ||| || || Sbjct 42067750 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACCCTCTCCGACTACAA 42067809 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || ||||| || || | |||||||| | | || ||||| || Sbjct 42067810 CATCCAGAAAGAGTCCACCTTGCATCTGGTGTTGCGTCTCAGGGGAGG 42067857 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || ||||| || ||||||| || || |||||| |||| || || || Sbjct 42095235 CATGCAGATCTTTGTAAAAACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 42095294 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | ||| ||||| |||||| | || || ||||| Sbjct 42095295 CGACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCA 42095354 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || |||||||||||| | ||||| || | || || || Sbjct 42095355 GCAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTATCTGACTACAA 42095414 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || ||||| || || | |||||||| || | || ||||| || Sbjct 42095415 CATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTCAGGGGAGG 42095462 >seq1136 Length=355867 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||||||||| ||||||| || || |||||| |||| || || || Sbjct 293392 CATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 293451 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | |||| ||||| | ||| ||||| |||||| | || || ||||| Sbjct 293452 CGACACCATTGAAAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCA 293511 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || ||||| |||||| | ||||| || || || || || Sbjct 293512 GCAGAGGTTGATCTTTGCTGGAAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAA 293571 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || ||||| || || | |||||||| || | || ||||| || Sbjct 293572 CATCCAGAAAGAGTCCACATTGCATCTGGTGCTGCGTCTCAGGGGAGG 293619 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||||||||| ||||||| || || |||||| |||| || || || Sbjct 293848 CATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 293907 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | ||||| | ||| |||||| |||||| | || || ||||| Sbjct 293908 TGACACCATTGAGAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 293967 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || |||||||||||| | ||||| || || || || || Sbjct 293968 GCAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAA 294027 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTAGAA 31424 ||| || ||||| || || | |||||||| | | || || || |||| || Sbjct 294028 CATCCAGAAAGAGTCCACATTGCATCTGGTGTTGCGTCTCAGAGGTGGTACAA 294080 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || ||||| || ||||||| || || |||||| |||| || || || Sbjct 320546 CATGCAGATCTTTGTAAAAACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 320605 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | ||| ||||| |||||| | || || ||||| Sbjct 320606 CGACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCA 320665 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | |||| || |||||||||||| | ||||| || || || || || Sbjct 320666 GCAGAGGTTAATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAA 320725 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || ||||| || || | |||||||| | | || ||||| || Sbjct 320726 CATCCAGAAAGAGTCCACCTTGCATCTGGTGTTGCGTCTCAGGGGAGG 320773 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||||| || || || || |||| || || || Sbjct 321002 CATGCAGATCTTCGTTAAGACCTTGACAGGAAAGACCATAACTCTCGAGGTAGAGCCAAG 321061 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | ||| ||||| |||||| | || || ||||| Sbjct 321062 CGACACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCA 321121 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 |||| | | || || |||||||||||| | ||||| | | | || || ||| || | Sbjct 321122 GCAGAGATTGATTTTTGCTGGCAAACAGCTAGAAGA-TGGACGCACCCTGTCCGACTACA 321180 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||| || ||||| || || | |||||||| | | || ||||| || Sbjct 321181 ACATCCAGAAAGAGTCCACCTTGCATCTGGTGTTGCGTCTCAGGGGAGG 321229 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || ||||| || ||||||| || || || ||| |||| || || || Sbjct 320318 CATGCAGATCTTTGTAAAAACCTTGACAGGAAAGACCATAACCCTCGAGGTAGAGCCAAG 320377 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | ||| ||||| |||||| | || || ||||| Sbjct 320378 CGACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCA 320437 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || |||||||||||| | ||||| || || ||| || || Sbjct 320438 GCAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTGTCCGACTACAA 320497 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || ||||| || || | |||||||| || Sbjct 320498 CATCCAGAAAGAGTCCACCTTGCATCTGGTGCT 320530 >seq1589 Length=338889 Score = 82.4 bits (90), Expect = 7e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 57524 AGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTA 57583 |||||||||| |||||||||| || || ||| | ||||||||||| ||||| ||||| Sbjct 63730 AGAGAATCCCAAACGATTTGTCATTTTCCCTATTCAGTATCCAGACATCTGGAAAATGTA 63671 Query 57584 CAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 |||| | ||| | || || || ||||| || || || ||| || Sbjct 63670 CAAACAAGCACAGGCTTCTTTCTGGACAGTTGAGGAGGTAAAC 63628 >seq19 Length=48449771 Score = 82.4 bits (90), Expect = 7e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 57524 AGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTA 57583 |||||||||| |||||||||| || || ||| | ||||||||||| ||||| ||||| Sbjct 32927080 AGAGAATCCCAAACGATTTGTCATTTTCCCTATTCAGTATCCAGACATCTGGAAAATGTA 32927021 Query 57584 CAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 |||| | ||| | || || || ||||| || || || ||| || Sbjct 32927020 CAAACAAGCACAGGCTTCTTTCTGGACAGTTGAGGAGGTAAAC 32926978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445755684890160