Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09] 1,923 sequences; 1,679,203,469 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq12 188 1e-42 seq21 109 1e-18 seq20 102 2e-16 seq19 102 2e-16 seq1589 87.8 3e-12 >seq12 Length=49182954 Score = 188 bits (208), Expect = 1e-42 Identities = 251/347 (72%), Gaps = 15/347 (4%) Strand=Plus/Plus Query 226504 ATACCTGATATGTCTACAGTGAATTCTGTTTGTTTCATTCCACACTTTGTTTGCACAAAG 226563 ||||||||||| || || ||||| |||| | |||| || |||| | ||||||| ||| Sbjct 45453301 ATACCTGATATCTCCACCGTGAAATCTGCTGTTTTCGTTTCACATTGAGTTTGCAGGAAG 45453360 Query 226564 AAGCTGAATTTTTCTGTCATTGCTGTAGTTGTGGTGTAGCGGCATGTGAAGCTGTTACTC 226623 || ||| || ||| |||||||||||| || ||||| | ||| |||||| | || | Sbjct 45453361 AATCTGGATGTTTTCGTCATTGCTGTATCTGGTGTGTATCTGCACGTGAAGATCTTTTCC 45453420 Query 226624 TGTTCACAGGAGTCATTAAGAAGCTCTTGTTCACAGATGACTGAGTCAGTAGGG------ 226677 | ||| ||| ||||| | |||||| ||| ||||| ||||| || | Sbjct 45453421 TTTTCGCAGACGTCATCAGGAAGCT---GTTTACAGACTTTAAAGTCATTATAGATCTCA 45453477 Query 226678 -GATC--GAAACTTACACTTTTTAATGGAACAATCAGGGCACTGCAGTGAGATGTTGCAG 226734 ||| |||||||| || | ||| | || ||| |||||| |||| ||||| Sbjct 45453478 GGATACAGAAACTTAGACAGTGTAACACAGCATGCAGTGCACTGTTCAGAGACTCTGCAG 45453537 Query 226735 GTGAGAGTTACTTCTTTCCCCACAGATCCAGTCACATCATCACAGCTTACACT---GATA 226791 |||| | | |||||||| ||||||| ||||||||||||||||||||| ||||| || | Sbjct 45453538 GTGAAAATCACTTCTTTTCCCACAGTTCCAGTCACATCATCACAGCTCACACTGCAGACA 45453597 Query 226792 TCTGAAATATAACAATGTATATCATAAAATACAGCAACTGAACAATA 226838 |||||| |||||||| ||| ||||||||||||||| || ||| || Sbjct 45453598 CCTGAAAAATAACAATATATGTCATAAAATACAGCAGCTCTACAGTA 45453644 Score = 167 bits (184), Expect = 4e-36 Identities = 213/295 (72%), Gaps = 9/295 (3%) Strand=Plus/Plus Query 226503 CATACCTGATATGTCTACAGTGAATTCTGTTTGTTTCATTCCACACTTTGTTTGCACAAA 226562 |||||||||||| || ||||||||||||| ||| || || || ||||||||||| Sbjct 45421956 CATACCTGATATATCCACAGTGAATTCTGCAGTTTTTGTTGAACTATTAGTTTGCACAAA 45422015 Query 226563 GAAGCTGAATTTTTCTGTCATTGCTGTAGTTGTGGTGTAGCGGCATGTGAAGCTGTTACT 226622 ||| |||||| |||| ||||||||||| ||| ||||| | |||||||||| | || | Sbjct 45422016 GAATCTGAATGTTTCCTTCATTGCTGTATTTGGAGTGTATCTGCATGTGAAGGTTTTCTT 45422075 Query 226623 CTGTTCACAGGAGTCATTAAGAAGCTCTTGTTCACAGATGACTGAGTCAGT--------- 226673 || | |||| ||||| | || | ||| | ||||||| | |||| | | Sbjct 45422076 CTTCTTACAGCGGTCATCAGGAGACCCTTCTCTACAGATGTCAGAGTAATTATAGTTCTC 45422135 Query 226674 AGGGGATCGAAACTTACACTTTTTAATGGAACAATCAGGGCACTGCAGTGAGATGTTGCA 226733 ||| | |||||||| || | ||| | ||||||| |||||| |||| | |||| Sbjct 45422136 AGGATACTGAAACTTAAACCATATAACACAGCAATCAGTGCACTGTTCAGAGAAGCTGCA 45422195 Query 226734 GGTGAGAGTTACTTCTTTCCCCACAGATCCAGTCACATCATCACAGCTTACACTG 226788 | ||| | |||||||||| ||||| |||||||||||||| ||| || ||| || Sbjct 45422196 GTTGAACATCACTTCTTTCCTCACAGCTCCAGTCACATCATTACATCTCACATTG 45422250 Score = 163 bits (180), Expect = 5e-35 Identities = 216/297 (73%), Gaps = 16/297 (5%) Strand=Plus/Plus Query 226503 CATACCTGATATGTCTACAGTGAATTCTGTTTGTTTCATTCCACACT--TTGTTTGCACA 226560 ||||||||| || || ||||||||||||| |||||| | | | ||| | ||||||||| Sbjct 45441410 CATACCTGAGATCTCCACAGTGAATTCTG-CTGTTTC-TCCTAAACTCGTAGTTTGCACA 45441467 Query 226561 AAGAAGCTGAATTTTTCTGTCATTGCTGTAGTTGTGGTGTAGCGGCATGTGAAGCTGTTA 226620 ||||| ||||| |||| ||||||||||| || ||||||| |||||||||| | || Sbjct 45441468 AAGAATCTGAACGTTTCCTTCATTGCTGTATCTGGAGTGTAGCTGCATGTGAAGGTTTTC 45441527 Query 226621 CTCTGTTCACAGGAGTCATTAAGAAGCTCTTGTTCACAGATGACTGAGTCAGT------- 226673 ||| | ||||| ||||| ||| ||||| | |||||| || |||||| | Sbjct 45441528 TTCTTCTTACAGGGGTCAT---GAAACTCTTCTCTACAGATAACAGAGTCATTATATTTC 45441584 Query 226674 --AGGGGATCGAAACTTACACTTTTTAATGGAACAATCAGGGCACTGCAGTGAGATGTTG 226731 ||| | |||||||| || ||||| | | |||| |||||| |||| | || Sbjct 45441585 TCAGGATACTGAAACTTATACCGTTTAACACAGCCTTCAGTGCACTGTTTAGAGAAGCTG 45441644 Query 226732 CAGGTGAGAGTTACTTCTTTCCCCACAGATCCAGTCACATCATCACAGCTTACACTG 226788 ||| ||| | |||||||||| ||||| ||||||||||| || ||| || ||| || Sbjct 45441645 CAGTTGAACATCACTTCTTTCCTCACAGCTCCAGTCACATTATTACATCTCACATTG 45441701 Score = 138 bits (152), Expect = 2e-27 Identities = 215/307 (70%), Gaps = 9/307 (3%) Strand=Plus/Plus Query 226491 AACAGCATATGCCATACCTGATATGTCTACAGTGAATTCTGTTTGTTTCATTCCACACTT 226550 ||||| | |||| |||||||||| || || ||||||| || | | | || | Sbjct 45496152 AACAGTACATGCAGTACCTGATATCTCCACTGTGAATTTCCCTTTTACTGGTGAAGACCT 45496211 Query 226551 TGTTTGCACAAAGAAGCTGAATTTTTCTGTCATTGCTGTAGTTGTGGTGTAGCGGCATGT 226610 ||||||| |||||| | || | |||| | ||||||| | || ||||| | |||||| Sbjct 45496212 GGTTTGCATAAAGAATCGGATTGTTTCATTTATTGCTGCATCTGGAGTGTATCTGCATGT 45496271 Query 226611 GAAGCTGTTACTCTGTTCACAGGAGTCATTAAGAAGCTCTTGTTCACAGATGACTGAGTC 226670 |||| |||| || ||||||||| | | || || |||| |||||| |||||| Sbjct 45496272 GAAGATGTTCTCCTTTTCACAGGATCCGCCAGGAGACTTTTGTCTACAGATTTCTGAGTT 45496331 Query 226671 -----AGT----AGGGGATCGAAACTTACACTTTTTAATGGAACAATCAGGGCACTGCAG 226721 ||| ||| | |||||||| || |||||||| | || ||||| Sbjct 45496332 TTTATAGTTCTCAGGATACAGAAACTTAAACATTTTAATGCAGTCTTCTTTGCACTTTTC 45496391 Query 226722 TGAGATGTTGCAGGTGAGAGTTACTTCTTTCCCCACAGATCCAGTCACATCATCACAGCT 226781 |||| ||||||||||||| ||||| || ||||||| ||||||||||||||||||||| Sbjct 45496392 AGAGACTCTGCAGGTGAGAGTCACTTCATTTCCCACAGTTCCAGTCACATCATCACAGCT 45496451 Query 226782 TACACTG 226788 |||||| Sbjct 45496452 CACACTG 45496458 Score = 123 bits (136), Expect = 5e-23 Identities = 173/244 (71%), Gaps = 9/244 (4%) Strand=Plus/Plus Query 226552 GTTTGCACAAAGAAGCTGAATTTTTCTGTCATTGCTGTAGTTGTGGTGTAGCGGCATGTG 226611 |||||||||||||| |||||| |||| |||||| |||| || ||||| ||||||| Sbjct 45343223 GTTTGCACAAAGAATCTGAATGTTTCATTCATTGTTGTATGTGGAGTGTATTTGCATGTG 45343282 Query 226612 AAGCTGTTACTCTGTTCACAGGAGTCATTAAGAAGCTCTTGTTCACAGATGACTGAGTCA 226671 ||| || | | || || ||||| | ||| || | | ||| | |||||| |||||||| Sbjct 45343283 AAGATGCTCCACTTTTTACAGGGGCCATCAACAGACCCTTCTCTACAGATTTCTGAGTCA 45343342 Query 226672 GT---------AGGGGATCGAAACTTACACTTTTTAATGGAACAATCAGGGCACTGCAGT 226722 | ||| | |||||||| || ||||| | || | || | |||| Sbjct 45343343 TTATATTTTTCAGGATACTGAAACTTATACAGTTTAACACAGCATTTAGTGGACTGTTCA 45343402 Query 226723 GAGATGTTGCAGGTGAGAGTTACTTCTTTCCCCACAGATCCAGTCACATCATCACAGCTT 226782 ||| | |||||| || | | | |||||||||||||| |||||||||||||| ||| || Sbjct 45343403 CAGACGCTGCAGGCGAAAATCATTTCTTTCCCCACAGTTCCAGTCACATCATTACACCTC 45343462 Query 226783 ACAC 226786 |||| Sbjct 45343463 ACAC 45343466 Score = 111 bits (122), Expect = 3e-19 Identities = 100/125 (80%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 226723 GAGATGTTGCAGGTGAGAGTTACTTCTTTCCCCACAGATCCAGTCACATCATCACAGCTT 226782 |||||| ||||||| | | | ||||| || ||||||| ||||||||||| ||||||||| Sbjct 45472361 GAGATGCTGCAGGTTAAAATGACTTCCTTGCCCACAGTTCCAGTCACATTATCACAGCTC 45472420 Query 226783 ACACTGATATCTGAAATATAACAATGTATATCATAAAATACAGCAACTGAACAATAACAT 226842 ||| ||| |||||||| |||| |||| |||| ||| |||| |||| || ||||| | Sbjct 45472421 ACATTGAAATCTGAAAAATAATAATGCATATTATATAATAGAGCA--GTAATAATAAAGT 45472478 Query 226843 TTTTT 226847 ||||| Sbjct 45472479 TTTTT 45472483 Score = 109 bits (120), Expect = 1e-18 Identities = 220/319 (69%), Gaps = 18/319 (6%) Strand=Plus/Plus Query 226482 TGAAATATAAACAGCAT----ATGCCATACCTGATATGTCTACAGTGAATTCTGTTTGTT 226537 |||| ||| ||||| | |||| |||||||||| || || ||||||||| || ||| Sbjct 45395788 TGAATTATGAACAGATTTTACATGCAGTACCTGATATATCCACTGTGAATTCT-TTGGTT 45395846 Query 226538 TCATTCCACA-CTTT--GTTTGCACAAAGAAGCTGAAT-TTTTCTGTCATTGCTGTAGTT 226593 || | |||| |||| | ||||||||||||||||||| ||||| || |||||||| | Sbjct 45395847 TC--TGCACAACTTTTCGCTTGCACAAAGAAGCTGAATGATTTCT-TCGTTGCTGTATCT 45395903 Query 226594 GTGGTGTAGCGGCATGTGAAGCTGTTACTCTGTTCACAGGAGTCATTAAGAAGCTCTTGT 226653 | |||| | |||||||||| | | | | | ||||||| | | | || |||| | | Sbjct 45395904 GAACTGTATCTGCATGTGAAGATTTGATTATTTTCACAGACACCCTCAGGATGCTCCTTT 45395963 Query 226654 TCACAGATGACTGAGTCAGT------AGGGGATCGAAACTTACACTTTTTAATGGAACAA 226707 ||| || ||| | | | ||| | |||| ||| || | ||| | | Sbjct 45395964 CTACACATTTCTGGGACTTTATTCTCAGGATACTGAAATTTAGACAGTGTAACACAGCCT 45396023 Query 226708 TCAGGGCACTGCAGTGAGATGTTGCAGGTGAGAGTTACTTCTTTCCCCACAGATCCAGTC 226767 |||| ||| |||| | ||||| ||| | | ||||||||||||||| ||||||| Sbjct 45396024 TCAGTCATCTGATCAGAGACGCTGCAGTTGAAAATCCCTTCTTTCCCCACAGTTCCAGTC 45396083 Query 226768 ACATCATCACAGCTTACAC 226786 ||||| | ||| || |||| Sbjct 45396084 ACATCCTTACATCTCACAC 45396102 Score = 105 bits (116), Expect = 1e-17 Identities = 83/98 (85%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 226911 ATTCTCTTACCATCATCACCTTGACAGACAGCAGTAAAGCTCCAAACCAGAAAGAACAGT 226970 |||| |||||| ||| || || || |||| || ||||||||||||||| | ||||||| Sbjct 45499278 ATTC-CTTACCCGTATCTCCATGGCACACAGTAGAAAAGCTCCAAACCAGTAGGAACAGT 45499336 Query 226971 TGCACAGCATTTACAGCATTCATGGTTGTAATTCTGCA 227008 ||||| ||||||||||||||||||||| | |||||||| Sbjct 45499337 TGCACTGCATTTACAGCATTCATGGTTTTGATTCTGCA 45499374 Score = 96.9 bits (106), Expect = 7e-15 Identities = 87/109 (80%), Gaps = 3/109 (3%) Strand=Plus/Plus Query 226903 TGAAGTTTATTCTCTTACCA---TCATCACCTTGACAGACAGCAGTAAAGCTCCAAACCA 226959 ||||| || ||||||||||| |||| |||||||||||| | || || | |||| || Sbjct 45456543 TGAAGGTTTTTCTCTTACCAGACTCATTACCTTGACAGACCGTGGTGAATATACAAAGCA 45456602 Query 226960 GAAAGAACAGTTGCACAGCATTTACAGCATTCATGGTTGTAATTCTGCA 227008 ||| ||| |||||||| |||||| || ||||||||| |||||||||| Sbjct 45456603 GAATGAAGAGTTGCACTGCATTTGTGGCGTTCATGGTTTTAATTCTGCA 45456651 Score = 87.8 bits (96), Expect = 3e-12 Identities = 92/119 (77%), Gaps = 3/119 (3%) Strand=Plus/Plus Query 226890 TCTCACACATAGCTG--AAGTTTATTCTCTTACCATCATCACCTTGACAGACAGCAGTAA 226947 |||||||||||| | |||||||||||||||||| ||||| ||| ||||| || || | Sbjct 45379010 TCTCACACATAGTTTCTAAGTTTATTCTCTTACCAGCATCAGTTTGGCAGACTGCGGTGA 45379069 Query 226948 AGCTCCAAACCAGAAAGAACAGTTGCACAGCATTTACAGCATTCATGG-TTGTAATTCT 227005 | | ||| | ||| | ||| | ||||| ||||||| || |||||| || ||||||| Sbjct 45379070 AACCCCACAGCAGGATGAAGATCTGCACTGCATTTATTACAGTCATGGCTTTTAATTCT 45379128 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 226904 GAAGTTTATTCTCTTACCATCATCACCTTGACAGACAGCAGTAAAGCTCCAAACCAGAAA 226963 ||| | ||| ||||||||| || | |||||| |||||||| |||||||||||||||| Sbjct 45475818 GAAATGTATACTCTTACCACCAATAGGTTGACATACAGCAGTGAAGCTCCAAACCAGAAC 45475877 Query 226964 GAACAGTTGCACAGCATTTACAGCATTCATGGTTGTAATTCT 227005 ||||| || |||| ||||||||||||||| | | ||| Sbjct 45475878 CAACAGCGCCAACACATTCACAGCATTCATGGTTTTGACTCT 45475919 >seq21 Length=45934066 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156 |||||||||||||| ||||| || | ||| ||||| ||||||| || |||||| ||| Sbjct 30773341 ACCTGAAACTCTCCAGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTACGGCTCAATG 30773400 Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216 || |||||||||| ||||| || ||| ||||| ||||| || | || ||||||| Sbjct 30773401 GATTCGTTGTTGCCCAGAATCTGAGCTGTGGAGGCAGTGGGCATTGGGGCCAGCAGCAGA 30773460 Query 244217 CTGTTCCTCACGCCGTGCCT 244236 ||||| | ||| || ||||| Sbjct 30773461 CTGTTACGCACCCCATGCCT 30773480 Score = 105 bits (116), Expect = 1e-17 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 244706 ACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTG 244765 ||||| || | ||||||||| |||||||| ||||| | || ||||| ||||||||| Sbjct 30778839 ACCTCATCGGCACTGGTGTACTCAACAATCTCTGTGCACAAATTGCTGCATTTGATGGTG 30778898 Query 244766 CCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCC 244825 ||||||| ||| || ||| |||| |||||||||||| ||||| |||||| | || Sbjct 30778899 CCCAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCTTTGTAAAGCATGTATGGTGTG 30778958 Query 244826 CCGGTCTC 244833 |||||||| Sbjct 30778959 CCGGTCTC 30778966 Score = 104 bits (114), Expect = 4e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 244322 CCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTA 244381 ||||||||||| || | ||| ||||||| | || || |||| || |||| | Sbjct 30776085 CCCTTGCTGACAGGACAGCCGGCGTAGGTTTGATACGGGCCGTATTCAGCAGCGAGCTCA 30776144 Query 244382 CAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGG 244441 ||||| || || || ||||| ||||||||||| |||||| | |||| | | | Sbjct 30776145 CAGCTGGACTCCAGAGCAGCGTAATAGATGGTCTCAAAGATCTGCGTGTTGAGGAGTTGA 30776204 Query 244442 GCCTTGCCGCAGGTG--AAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCA 244499 |||| ||||| || |||| | ||| | |||||| | |||||||| ||||| | Sbjct 30776205 GCCT--CCGCACTCTCAAATGGGAAACGCATGAGGATGAAGGCATCGGCCAGACCCTGAA 30776262 Query 244500 CGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAG 244534 ||||||| |||||||| | ||| |||||||||||| Sbjct 30776263 CGCCGATCCCGATGGGCCGGTGGCGCTTGTTGGAG 30776297 >seq20 Length=55201332 Score = 102 bits (112), Expect = 2e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || ||||| |||| |||||| | || || ||||| ||||||||||| || | || || Sbjct 29495030 GGTGAGAGAGTGGTGGCCTTTGCTGCAGTGGAGGGAATCTTCTTCTCTGGGTCTTTTGCT 29494971 Query 42756 TCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTC 42815 || || |||||||| ||| ||| || ||||| |||||||||||||| || || || Sbjct 29494970 TCTATTTTCTGGCTAAAGAAGAGGGGACTCATGCCTGGACTCACCTTCTCCAATGAGCTG 29494911 Query 42816 ATCAGCAGGGACGAGG 42831 |||||||| || |||| Sbjct 29494910 ATCAGCAGAGATGAGG 29494895 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 43071 CCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGC 43130 || || ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 29493330 CCTTTTGACTTCATGGAGAACATTTCGTTGGAGGGCAAGACCAACTTCTTCGAGAAGCGA 29493271 Query 43131 GTCGCCGACTACCAG 43145 || | ||| |||||| Sbjct 29493270 GTGGGCGAGTACCAG 29493256 >seq19 Length=48449771 Score = 102 bits (112), Expect = 2e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || ||||| |||| |||||| | || || ||||| ||||||||||| || | || || Sbjct 47567438 GGTGAGAGAGTGGTGGCCTTTGCTGCAGTGGAGGGAATCTTCTTCTCTGGGTCTTTTGCT 47567379 Query 42756 TCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTC 42815 || || |||||||| ||| ||| || ||||| |||||||||||||| || || || Sbjct 47567378 TCTATTTTCTGGCTAAAGAAGAGGGGACTCATGCCTGGACTCACCTTCTCCAATGAGCTG 47567319 Query 42816 ATCAGCAGGGACGAGG 42831 |||||||| || |||| Sbjct 47567318 ATCAGCAGAGATGAGG 47567303 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 43071 CCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGC 43130 || || ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 47565750 CCTTTTGACTTCATGGAGAACATTTCGTTGGAGGGCAAGACCAACTTCTTCGAGAAGCGA 47565691 Query 43131 GTCGCCGACTACCAG 43145 || | ||| |||||| Sbjct 47565690 GTGGGCGAGTACCAG 47565676 Score = 87.8 bits (96), Expect = 3e-12 Identities = 103/137 (75%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || ||| || ||||||| ||| | || || || ||||| || ||||| || | || || Sbjct 32919115 GGTGAGCGGTTGGTAGCGTTTGCAGCAGTGGAAGGCATTTTTTTCTCAGGATCATTTGCT 32919056 Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 |||||| ||| | ||| | | ||| | |||||| |||||||||| ||| || || || Sbjct 32919055 GCCATCTATTGGTTAAAGAAAAGAGGCCT-GATGCCTGGACTCACCTACTCCAATGAGCT 32918997 Query 42815 CATCAGCAGGGACGAGG 42831 ||||||||| ||||||| Sbjct 32918996 CATCAGCAGAGACGAGG 32918980 >seq1589 Length=338889 Score = 87.8 bits (96), Expect = 3e-12 Identities = 103/137 (75%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || ||| || ||||||| ||| | || || || ||||| || ||||| || | || || Sbjct 55765 GGTGAGCGGTTGGTAGCGTTTGCAGCAGTGGAAGGCATTTTTTTCTCAGGATCATTTGCT 55706 Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 |||||| ||| | ||| | | ||| | |||||| |||||||||| ||| || || || Sbjct 55705 GCCATCTATTGGTTAAAGAAAAGAGGCCT-GATGCCTGGACTCACCTACTCCAATGAGCT 55647 Query 42815 CATCAGCAGGGACGAGG 42831 ||||||||| ||||||| Sbjct 55646 CATCAGCAGAGACGAGG 55630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944316500446480