Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09] 1,923 sequences; 1,679,203,469 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq7 118 9e-22 >seq7 Length=74282399 Score = 118 bits (130), Expect = 9e-22 Identities = 124/163 (76%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || ||||| | || || | ||| || || | |||| |||||||| ||||| || || Sbjct 71539815 AGTCCAGTGATGTGGGCGATCATGTAGGTCAGCAGGGCGTAGCTGGCGATGTTGAATGGG 71539756 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || || | ||| ||||||||||| | ||| ||||||||||| || | |||||||| | Sbjct 71539755 ACACCGAGACCGATGTCTCCCGATCGCTGGTACAGCTGACATGACAACTCACCGTTCGAC 71539696 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCA 20399 || ||||| ||||| ||| ||||||||||| |||||||||| Sbjct 71539695 ACGTAAAACTGACACAACGCATGACAGGGCGGCAGCGCCATCA 71539653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441362190501320