Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09] 1,923 sequences; 1,679,203,469 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq5 82.4 9e-11 >seq5 Length=72500376 Score = 82.4 bits (90), Expect = 9e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 153906 GCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACA 153965 || || ||||| |||||||||| ||| | ||||||||||| ||||| |||||||||||| Sbjct 66179108 GCTCTTCAGACCCGAGAGCAGCACATCCGCAGAGACAAAGCCACCAGCAACATCTGCACA 66179167 Query 153966 GCTCAGGCACTGC 153978 ||||||| || || Sbjct 66179168 GCTCAGGTACAGC 66179180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579198877172320