Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09]
1,923 sequences; 1,679,203,469 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1136 127 4e-24
seq5 127 4e-24
seq10 95.1 2e-14
>seq1136
Length=355867
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| || ||||| | || || ||||||||||| || | |||||| || || ||||||
Sbjct 320548 ATGCCTCCTCTAAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCG 320489
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| |||| ||||| || ||||| || || ||||| || |||||
Sbjct 320488 GACAGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGG 320429
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || |||||||| ||||| ||||||| || | ||| ||| || ||| | |||
Sbjct 320428 GGAATGCCTTCTTTGTCTTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCT 320369
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || ||||| || || ||||| | ||||||||||| || |||||
Sbjct 320368 ACCTCGAGGGTTATGGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 320319
Score = 118 bits (130), Expect = 2e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| || ||||||||||| || | |||||| || || ||||| || | || | |
Sbjct 321445 CGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCA 321386
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| |||| ||||| |||||||| || || ||||| || ||||| || || ||||||||
Sbjct 321385 TCTTCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTG 321326
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| ||||||| || | ||| ||| || ||| | ||| || || || || ||
Sbjct 321325 TCTTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATG 321266
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| | ||||||||||| || |||||
Sbjct 321265 GTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 321231
Score = 116 bits (128), Expect = 7e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
||||||||||| || | |||||| || || ||||| || | || | ||| |||
Sbjct 320755 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCT 320696
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||||| || ||||| ||||| ||||| || ||||| || || |||||||| |||||
Sbjct 320695 AGCTGTTTGCCAGCAAAGATTAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCTTGG 320636
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
||||||| || | ||| ||| || ||| | ||| || || || || || || ||
Sbjct 320635 ATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTCTTT 320576
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| | ||||||||||| || |||||
Sbjct 320575 CCTGTCAAGGTTTTTACAAAGATCTGCAT 320547
Score = 116 bits (128), Expect = 7e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
||||||||||| || | |||||| || || |||||||| | || | ||| |||
Sbjct 321211 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCT 321152
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||||| || |||||||| |||||||| || ||||| || || |||||||| |||||
Sbjct 321151 AGCTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCTTGG 321092
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
||||||| || | || ||| || ||| | ||| || || |||||||| || ||
Sbjct 321091 ATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCTACCTCGAGAGTTATGGTCTTT 321032
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| | || || || || || |||||
Sbjct 321031 CCTGTCAAGGTCTTAACGAAGATCTGCAT 321003
Score = 113 bits (124), Expect = 8e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| || |||||||||||||| | |||||| || || ||||| || | || | |
Sbjct 293607 CGCAGCACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCA 293548
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| |||| |||||||| ||||| || || ||||| || ||||| || || ||||||||
Sbjct 293547 TCTTCTAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTG 293488
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| ||||||| || | ||| ||| || ||| | ||| || || || || ||
Sbjct 293487 TCTTGGATTTTGGCCTTGACGTTTTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATG 293428
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| | || ||||| || || |||||
Sbjct 293427 GTCTTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 293393
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| || ||||| | || || ||||||||||| || | |||||| || || ||||||
Sbjct 320320 ATGCCTCCTCTAAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCG 320261
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| |||| ||||| || ||||| || || ||||| || |||||
Sbjct 320260 GACAGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGG 320201
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || |||||||| || || ||||||| || | || ||| || || | |||
Sbjct 320200 GGAATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCT 320141
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || ||||| || || ||||| ||||| || |||||
Sbjct 320140 ACCTCGAGGGTGATGGTCTTACCAGTAAGGGTTTTGACAAAGATCTGCAT 320091
Score = 107 bits (118), Expect = 3e-18
Identities = 166/237 (70%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| | |||||||||| | || | |||||||||||||| | |||||| || ||
Sbjct 294085 AATTTTTGTACCACCTCTGAGACGCAACACCAGATGCAATGTGGACTCTTTCTGGATGTT 294026
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || | || | ||| |||| ||||| || ||||| || || ||||| ||
Sbjct 294025 GTAGTCAGACAGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTG 293966
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||||| || || |||||||| || || ||||||| || | || ||| || ||
Sbjct 293965 GTCAGGGGGAATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACT 293906
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| ||| || || || || || || || ||||| | || ||||| || || |||||
Sbjct 293905 TGGCTCTACCTCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 293849
Score = 102 bits (112), Expect = 1e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
||||||||||| || | |||||| || || |||||||| | || | ||| |||
Sbjct 321667 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCT 321608
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| |||||||| ||||| || || ||||| || ||||| || || |||||||| || ||
Sbjct 321607 AGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGG 321548
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
||||||| || | || ||| || || | ||| || || |||||||| || ||
Sbjct 321547 ATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACCTCGAGAGTTATGGTCTTT 321488
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| | || || || || || |||||
Sbjct 321487 CCTGTCAAGGTCTTAACGAAGATCTGCAT 321459
Score = 100 bits (110), Expect = 5e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| || ||||||||||| || | |||||| || || |||||||| | || | |
Sbjct 293835 CGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA 293776
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| |||| ||||| |||||||| || || ||||| || ||||| || || ||||||||
Sbjct 293775 TCTTCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTG 293716
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
|| || ||||| | || | ||| ||| || || | ||| || || || || ||
Sbjct 293715 TCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCAAGGGTGATG 293656
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| ||||| || || || || || || || |||||
Sbjct 293655 GTCTTACCAGTAAGGGTCTTGACGAAGATCTGCAT 293621
Score = 98.7 bits (108), Expect = 2e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
||||||||||| || | |||||| || || |||||||| | || | ||| |||
Sbjct 293373 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCT 293314
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||||| |||||||| || || ||||| || ||||| || || |||||||| || ||
Sbjct 293313 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGG 293254
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
||||| | || | ||| ||| || || | ||| || || || || || || |||
Sbjct 293253 ATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCAAGGGTGATGGTCTTA 293194
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || || || |||||
Sbjct 293193 CCAGTAAGGGTCTTGACGAAGATCTGCAT 293165
Score = 95.1 bits (104), Expect = 2e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| || ||||||||||| || | |||||| || || ||||| || | || | |
Sbjct 320989 CGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCA 320930
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| |||| ||||| |||||||| || || ||||| || ||||| || || ||||||||
Sbjct 320929 TCTTCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTG 320870
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| ||||||| || | || ||| || || | ||| || || || || ||
Sbjct 320869 TCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACCTCGAGGGTGATG 320810
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| | || || || || || |||||
Sbjct 320809 GTCTTTCCTGTCAAGGTCTTAACGAAGATCTGCAT 320775
>seq5
Length=72500376
Score = 127 bits (140), Expect = 4e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| || |||||||||||||| | |||||| || || |||||||| | || | |
Sbjct 42094994 CGCAGCACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA 42094935
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| ||||| |||||||| ||||| || || ||||| || ||||| || || ||||||||
Sbjct 42094934 TCTTCTAACTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTG 42094875
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| ||||||| || | || ||| || ||| | ||| || || || || ||
Sbjct 42094874 TCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATG 42094815
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| | ||||||||||| || |||||
Sbjct 42094814 GTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 42094780
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| || ||||| | || || ||||||||||| || | |||||| || || ||||||
Sbjct 42094553 ATGCCTCCTCTAAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCG 42094494
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| |||| ||||| || ||||| || || ||||| || |||||
Sbjct 42094493 GACAGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGG 42094434
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || |||||||| ||||| ||||||| || | || ||| || || | |||
Sbjct 42094433 GGAATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCT 42094374
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || |||||||| || || ||||| ||||| || |||||
Sbjct 42094373 ACCTCGAGGGTGATGGTTTTACCAGTAAGGGTTTTGACAAAGATCTGCAT 42094324
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| || ||||| | || || ||||||||||| || | |||||| || || ||||||
Sbjct 42094781 ATGCCTCCTCTAAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCG 42094722
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| |||| ||||| || ||||| || || ||||| || |||||
Sbjct 42094721 GACAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGG 42094662
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || |||||||| || || ||||||| || | ||| ||| || ||| | |||
Sbjct 42094661 GGAATGCCTTCTTTGTCCTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCT 42094602
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || || ||||| | ||||||||||| || |||||
Sbjct 42094601 ACCTCGAGGGTGATGGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 42094552
Score = 118 bits (130), Expect = 2e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| || ||||||||||| || | |||||| || || ||||| |||| || | |
Sbjct 42095450 CGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGATAGGGTGCGGCCA 42095391
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| |||| ||||| || ||||| || || ||||| || ||||| || || ||||||||
Sbjct 42095390 TCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTG 42095331
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| ||||||| || | ||| ||| || ||| | ||| || || || || ||
Sbjct 42095330 TCTTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATG 42095271
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| | ||||||||||| || |||||
Sbjct 42095270 GTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 42095236
Score = 113 bits (124), Expect = 8e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| || |||||||||||||| | |||||| || || ||||| || | || | |
Sbjct 42067389 CGCAGCACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCA 42067330
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| |||| |||||||| ||||| || || ||||| || ||||| || || ||||||||
Sbjct 42067329 TCTTCTAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTG 42067270
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| ||||||| || | ||| ||| || ||| | ||| || || || || ||
Sbjct 42067269 TCTTGGATTTTGGCCTTGACGTTTTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATG 42067210
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| | || ||||| || || |||||
Sbjct 42067209 GTCTTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 42067175
Score = 113 bits (124), Expect = 8e-20
Identities = 167/237 (70%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| | |||||||||| | || | |||||||||||||| | |||||| || ||
Sbjct 42068323 AATTTTTGTACCACCTCTGAGACGCAACACCAGATGCAATGTGGACTCTTTCTGGATGTT 42068264
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| || || || | ||| || | ||||| || ||||| || || ||||| ||
Sbjct 42068263 GTAGTCAGACAAGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAACCTCTGCTG 42068204
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||||| || || |||||||| || || ||||||| || | || ||| || |||
Sbjct 42068203 GTCAGGGGGAATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCT 42068144
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| ||| || || || || || || || ||||| | || ||||| || || |||||
Sbjct 42068143 TGGCTCTACCTCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 42068087
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| || ||||| | || || ||||||||||| || | |||||| || || ||||||
Sbjct 42095237 ATGCCTCCTCTAAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCG 42095178
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| |||| ||||| || ||||| || || ||||| || |||||
Sbjct 42095177 GACAGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGG 42095118
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || |||||||| || || ||||||| || | ||| ||| || ||| | |||
Sbjct 42095117 GGAATGCCTTCTTTGTCCTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCT 42095058
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || || ||||| | || || || || || |||||
Sbjct 42095057 ACCTCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 42095008
Score = 102 bits (112), Expect = 1e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|||||||||||||| | |||||| || || |||||||| | || | ||| |||
Sbjct 42067155 ACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCT 42067096
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||||| |||||||| || || ||||| || ||||| || || |||||||| || ||
Sbjct 42067095 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGG 42067036
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
||||| | || | ||| ||| || || | ||| || || || || || || |||
Sbjct 42067035 ATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCAAGGGTGATGGTCTTA 42066976
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || || || |||||
Sbjct 42066975 CCAGTAAGGGTCTTGACGAAGATCTGCAT 42066947
Score = 102 bits (112), Expect = 1e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
||||||||||| || | |||||| || || |||||||| | || | ||| |||
Sbjct 42095672 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCT 42095613
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| |||||||| ||||| || || ||||| || ||||| || || |||||||| || ||
Sbjct 42095612 AGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGG 42095553
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
||||||| || | || ||| || || | ||| || || |||||||| || ||
Sbjct 42095552 ATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACCTCGAGAGTTATGGTCTTT 42095493
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| | || || || || || |||||
Sbjct 42095492 CCTGTCAATGTCTTAACGAAGATCTGCAT 42095464
Score = 100 bits (110), Expect = 5e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| || ||||||||||| || | |||||| || || |||||||| | || | |
Sbjct 42067617 CGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA 42067558
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| |||| ||||| |||||||| || || ||||| || ||||| || || ||||||||
Sbjct 42067557 TCTTCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTG 42067498
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
|| || ||||| | || | ||| ||| || || | ||| || || || || ||
Sbjct 42067497 TCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCAAGGGTGATG 42067438
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| ||||| || || || || || || || |||||
Sbjct 42067437 GTCTTACCAGTAAGGGTCTTGACGAAGATCTGCAT 42067403
Score = 98.7 bits (108), Expect = 2e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
||||||||||| || | |||||| || || |||||||| | || | ||| |||
Sbjct 42067839 ACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCT 42067780
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| || || |||||||| || || ||||| || ||||| || || |||||||| || ||
Sbjct 42067779 AGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGG 42067720
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
||||||| || | || ||| || ||| | ||| || || || || || || ||
Sbjct 42067719 ATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCTACCTCGAGGGTGATGGTCTTT 42067660
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| | || ||||| || || |||||
Sbjct 42067659 CCTGTCAAGGTCTTTACGAAGATCTGCAT 42067631
Score = 95.1 bits (104), Expect = 2e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| || ||||||||||| || | |||||| || || ||||| || | || | |
Sbjct 42068073 CGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCA 42068014
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| |||| ||||| |||||||| || || ||||| || ||||| || || ||||||||
Sbjct 42068013 TCTTCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTG 42067954
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
|| || ||||| | || | ||| ||| || || | ||| || || || || ||
Sbjct 42067953 TCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACCTCGAGGGTGATG 42067894
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| | || ||||| || || |||||
Sbjct 42067893 GTCTTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 42067859
Score = 95.1 bits (104), Expect = 2e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| || ||||||||||| || | |||||| || || ||||| || | || | |
Sbjct 42095906 CGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCA 42095847
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| |||| ||||| || ||||| || || ||||| || ||||| || || ||||||||
Sbjct 42095846 TCTTCTAGCTGTTTACCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTG 42095787
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| ||||||| || | || ||| || || | ||| || || || || ||
Sbjct 42095786 TCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCGACCTCAAGGGTGATG 42095727
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| | ||||| || || || |||||
Sbjct 42095726 GTCTTTCCTGTCAAGGTTTTAACGAAAATCTGCAT 42095692
>seq10
Length=45420867
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||||| || || || ||||| | || | ||| || || |||||||||
Sbjct 44694167 ATACCACCTCTCAGACGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTATAGTCG 44694108
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| || | || || |||||||| || | | ||| || |||||
Sbjct 44694107 GACAGGGTGCGTCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCAGGT 44694048
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || || |||||||| || |||| ||| | || ||| || || | |||
Sbjct 44694047 GGGATGCCCTCCTTATCTTGAATCTTGGCTTTCACGTTCTCAATGGTGTCACTGGGCTCG 44693988
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || || ||||| || ||||| || || || || |||||
Sbjct 44693987 ACCTCAAGAGTGATGGTCTTACCAGTCAGCGTCTTCACGAAGATCTGCAT 44693938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899632774557360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |