Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09]
1,923 sequences; 1,679,203,469 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq1136 149 5e-31
seq5 149 5e-31
seq10 120 2e-22
>seq1136
Length=355867
Score = 149 bits (164), Expect = 5e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| || | ||||||||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 320545 CCTCCTCTAAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 320486
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || |||||||||||| | ||||| || ||||| || || |||
Sbjct 320485 AGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 320426
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| |||||| | || | ||||| | |||||
Sbjct 320425 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACC 320366
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || ||||| || || || || |||||||| ||||| ||||||||
Sbjct 320365 TCGAGGGTTATGGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 320319
Score = 149 bits (164), Expect = 5e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | ||||| ||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 321229 CCTCCCCTGAGACGCAACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 321170
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || |||||||||||| | |||||||| ||||| || || |||
Sbjct 321169 AGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGGGGA 321110
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| ||||| | || | ||||| | |||||
Sbjct 321109 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCTACC 321050
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| |||||||| || || || || ||||| ||||| || ||||||||
Sbjct 321049 TCGAGAGTTATGGTCTTTCCTGTCAAGGTCTTAACGAAGATCTGCAT 321003
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | ||||||||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 321457 CCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 321398
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || |||||||| ||| | ||||| || ||||| || || |||
Sbjct 321397 AGGGTGCGGCCATCTTCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGA 321338
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| |||||| | || | ||||| | |||||
Sbjct 321337 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACC 321278
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || || |||||||| ||||| ||||||||
Sbjct 321277 TCGAGGGTGATGGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 321231
Score = 140 bits (154), Expect = 2e-28
Identities = 172/235 (73%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| || | ||||||||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 320317 CCTCCTCTAAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 320258
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || |||||||||||| | ||||| || ||||| || || |||
Sbjct 320257 AGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 320198
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || |||||||| || | ||| ||||| | || | |||||| | |||||
Sbjct 320197 ATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACC 320138
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAAC 29794
|| || || || || || ||||| | |||||| ||||| |||||||| | ||||
Sbjct 320137 TCGAGGGTGATGGTCTTACCAGTAAGGGTTTTGACAAAGATCTGCATCTGTAAAC 320083
Score = 140 bits (154), Expect = 2e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | ||||| ||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 320773 CCTCCCCTGAGACGCAACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 320714
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || |||||||||||| | || || || ||||| || || |||
Sbjct 320713 AGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATTAACCTCTGCTGGTCAGGGGGA 320654
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| |||||| | || | ||||| | |||||
Sbjct 320653 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACC 320594
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || || |||||||| ||||| ||||||||
Sbjct 320593 TCGAGGGTGATGGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 320547
Score = 140 bits (154), Expect = 2e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | ||||||||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 321001 CCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 320942
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || |||||||| ||| | ||||| || ||||| || || |||
Sbjct 320941 AGGGTGCGGCCATCTTCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGA 320882
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| ||||| | || | |||||| | |||||
Sbjct 320881 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACC 320822
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || || ||||| ||||| || ||||||||
Sbjct 320821 TCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTAACGAAGATCTGCAT 320775
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | ||||||||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 293619 CCTCCCCTGAGACGCAGCACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAGAC 293560
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || ||||| |||||| | ||||| || ||||| || || |||
Sbjct 293559 AGGGTGCGGCCATCTTCTAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 293500
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| ||||| |||| | ||||| | |||||
Sbjct 293499 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTTTCAATGGTGTCGCTTGGCTCTACC 293440
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || || ||||| || || || ||||||||
Sbjct 293439 TCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 293393
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | ||||||||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 293847 CCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 293788
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || |||||||| ||| | ||||| || ||||| || || |||
Sbjct 293787 AGGGTGCGTCCATCTTCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGA 293728
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || |||||||| || | ||| |||||| | || | |||||| | || ||
Sbjct 293727 ATGCCTTCTTTGTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACC 293668
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || ||||| | ||| || || || ||||||||
Sbjct 293667 TCAAGGGTGATGGTCTTACCAGTAAGGGTCTTGACGAAGATCTGCAT 293621
Score = 122 bits (134), Expect = 7e-23
Identities = 167/232 (72%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 29556 TTGT-CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAAT 29614
|||| || || || | ||||| ||||| ||| | ||||| ||||| || ||||| || |
Sbjct 294080 TTGTACCACCTCTGAGACGCAACACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGT 294021
Query 29615 CCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCG 29674
| | | |||||| ||| || || |||||||||||| | ||||| || ||||| || |
Sbjct 294020 CAGACAGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAG 293961
Query 29675 GCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTT 29734
| ||||| || |||||||| || | ||| ||||| | || | |||||| | |
Sbjct 293960 GGGGAATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCT 293901
Query 29735 CTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||| || || || || || || || || ||||| || || || ||||||||
Sbjct 293900 CTACCTCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 293849
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| | | ||||||||| | || | || || ||||| || ||||| || || |
Sbjct 321913 CCTCCTCGGAGACGCAGCACAAGGTGCAAAGTAGACTCTTTCTGGATGTTGTAGTCAGAC 321854
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| || ||| || || ||||| |||||| | ||||| || ||||| || || |||
Sbjct 321853 AGGGTTCGGCCATCTTCTAGCTGTTTACCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 321794
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| ||||| | || | |||||| | |||||
Sbjct 321793 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACC 321734
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || || |||||||||||||| ||||||||
Sbjct 321733 TCGAGGGTGATGGTCTTTCCTGTCAAGGTTTTAACAAAAATCTGCAT 321687
>seq5
Length=72500376
Score = 149 bits (164), Expect = 5e-31
Identities = 174/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| || | ||||||||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 42094550 CCTCCTCTAAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 42094491
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || |||||||||||| | ||||| || ||||| || || |||
Sbjct 42094490 AGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42094431
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| ||||| | || | |||||| | |||||
Sbjct 42094430 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACC 42094371
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAAC 29794
|| || || || ||||| ||||| | |||||| ||||| |||||||| | ||||
Sbjct 42094370 TCGAGGGTGATGGTTTTACCAGTAAGGGTTTTGACAAAGATCTGCATCTGTAAAC 42094316
Score = 149 bits (164), Expect = 5e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | ||||||||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 42095462 CCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAT 42095403
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || |||||||||||| | ||||| || ||||| || || |||
Sbjct 42095402 AGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42095343
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| |||||| | || | ||||| | |||||
Sbjct 42095342 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACC 42095283
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || || |||||||| ||||| ||||||||
Sbjct 42095282 TCGAGGGTGATGGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 42095236
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | ||||||||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 42095918 CCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 42095859
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || ||||| |||||| | ||||| || ||||| || || |||
Sbjct 42095858 AGGGTGCGGCCATCTTCTAGCTGTTTACCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42095799
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| ||||| | || | |||||| | || ||
Sbjct 42095798 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCGACC 42095739
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || || || ||||||||||| || ||||||||
Sbjct 42095738 TCAAGGGTGATGGTCTTTCCTGTCAAGGTTTTAACGAAAATCTGCAT 42095692
Score = 140 bits (154), Expect = 2e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| || | ||||||||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 42094778 CCTCCTCTAAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 42094719
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || |||||||||||| | ||||| || ||||| || || |||
Sbjct 42094718 AGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42094659
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || |||||||| || | ||| |||||| | || | ||||| | |||||
Sbjct 42094658 ATGCCTTCTTTGTCCTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACC 42094599
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || || |||||||| ||||| ||||||||
Sbjct 42094598 TCGAGGGTGATGGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 42094552
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | ||||||||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 42067401 CCTCCCCTGAGACGCAGCACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAGAC 42067342
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || ||||| |||||| | ||||| || ||||| || || |||
Sbjct 42067341 AGGGTGCGGCCATCTTCTAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42067282
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| ||||| |||| | ||||| | |||||
Sbjct 42067281 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTTTCAATGGTGTCGCTTGGCTCTACC 42067222
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || || ||||| || || || ||||||||
Sbjct 42067221 TCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 42067175
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | ||||||||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 42067629 CCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 42067570
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || |||||||| ||| | ||||| || ||||| || || |||
Sbjct 42067569 AGGGTGCGGCCATCTTCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42067510
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || |||||||| || | ||| |||||| | || | |||||| | || ||
Sbjct 42067509 ATGCCTTCTTTGTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACC 42067450
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || ||||| | ||| || || || ||||||||
Sbjct 42067449 TCAAGGGTGATGGTCTTACCAGTAAGGGTCTTGACGAAGATCTGCAT 42067403
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | ||||||||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 42095006 CCTCCCCTAAGACGCAGCACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCGGAC 42094947
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || | ||||| |||||| | ||||| || ||||| || || |||
Sbjct 42094946 AGGGTGCGGCCATCTTCTAACTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42094887
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| ||||| | || | ||||| | |||||
Sbjct 42094886 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCTACC 42094827
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || || |||||||| ||||| ||||||||
Sbjct 42094826 TCGAGGGTGATGGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 42094780
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | ||||||||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 42068085 CCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 42068026
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || |||||||| ||| | ||||| || ||||| || || |||
Sbjct 42068025 AGGGTGCGGCCATCTTCTAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42067966
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || |||||||| || | ||| |||||| | || | |||||| | || ||
Sbjct 42067965 ATGCCTTCTTTGTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTTGGCTCGACC 42067906
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || || ||||| || || || ||||||||
Sbjct 42067905 TCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 42067859
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| || | ||||||||||| ||| | ||||| ||||| || ||||| || || |
Sbjct 42095234 CCTCCTCTAAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 42095175
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || |||||||||||| | ||||| || ||||| || || |||
Sbjct 42095174 AGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42095115
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || |||||||| || | ||| |||||| | || | ||||| | |||||
Sbjct 42095114 ATGCCTTCTTTGTCCTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACC 42095055
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || || ||||| || || || ||||||||
Sbjct 42095054 TCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 42095008
Score = 118 bits (130), Expect = 8e-22
Identities = 166/232 (72%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 29556 TTGT-CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAAT 29614
|||| || || || | ||||| ||||| ||| | ||||| ||||| || ||||| || |
Sbjct 42068318 TTGTACCACCTCTGAGACGCAACACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGT 42068259
Query 29615 CCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCG 29674
| | | |||||| ||| || || |||||||||||| | ||||| || ||||| || |
Sbjct 42068258 CAGACAAGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAG 42068199
Query 29675 GCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTT 29734
| ||||| || |||||||| || | ||| ||||| | || | ||||| | |
Sbjct 42068198 GGGGAATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCT 42068139
Query 29735 CTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||| || || || || || || || || ||||| || || || ||||||||
Sbjct 42068138 CTACCTCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 42068087
>seq10
Length=45420867
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || |||| ||||||||||| || || ||||| ||||| |||||||| || || |
Sbjct 44693480 CCGCCTCTCAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAGTCGGAC 44693421
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || || ||||||||| | |||| | ||||| || || ||
Sbjct 44693420 AGGGTGCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGTGGG 44693361
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| ||||| || ||||| |||||| | ||||| | || | ||||| |||| ||
Sbjct 44693360 ATGCCCTCCTTATCTTG-AATTTTAGCCTTGACGTTCTCAATGGTGTCGCTTGGTTCCAC 44693302
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || || ||||| || | || || ||||| ||||||||
Sbjct 44693301 CTCTAGAGTGATGGTCTTGCCGGTCAGCGTCTTCACAAAGATCTGCAT 44693254
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | || ||||||| || || ||||| || || || ||||| || || |
Sbjct 44694392 CCGCCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 44694333
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || || |||||||| | |||| | ||||| || || ||
Sbjct 44694332 AGGGTGCGTCCATCTTCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGTGGG 44694273
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||| ||||| || | |||| || ||| | || | || ||| |||| ||
Sbjct 44694272 ATGCCCTCCTTGTCCTGGATTTTTGCCTTCACATTCTCAATGGTATCACTTGGTTCCACC 44694213
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||||||| || || |||||||||||||| || || || ||||||||
Sbjct 44694212 TCAAGAGTGATGGTCTTGCCAGTTAAGGTCTTGACGAAGATCTGCAT 44694166
Score = 102 bits (112), Expect = 6e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | || || || | ||| || ||||| ||||| || ||||| || || |
Sbjct 44693708 CCGCCCCTGAGGCGGAGAACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 44693649
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || |||||||||||| | |||| | ||||| || || ||
Sbjct 44693648 AGGGTGCGTCCATCTTCAAGCTGTTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGTGGG 44693589
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| ||||| || ||||| ||| || | ||| || | || | |||||| | || ||
Sbjct 44693588 ATGCCCTCCTTATCTTG-AATCTTGGCTTTCACGTTCTCAATGGTGTCACTGGGCTCGAC 44693530
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||||||| || ||||| || || | || || || || ||||||||
Sbjct 44693529 CTCAAGAGTGATGGTTTTTCCTGTCAGAGTCTTGACGAAGATCTGCAT 44693482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385210171786143
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |