Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09]
1,923 sequences; 1,679,203,469 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1136 161 2e-34
seq10 156 8e-33
seq5 152 1e-31
seq16 91.5 3e-13
>seq1136
Length=355867
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||||| | |||||| || | ||||| |||||| |||||||| || || || |||||
Sbjct 321913 CCTCCTCGGAGACGCAGCACAAGGTGCAAAGTAGACTCTTTCTGGATGTTGTAGTCAGAC 321854
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| ||| || |||||||| ||||| ||||||||||| | || || || || || ||
Sbjct 321853 AGGGTTCGGCCATCTTCTAGCTGTTTACCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 321794
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || ||||| || || || || || || ||||| || ||| | || |||||
Sbjct 321793 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACC 321734
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| |||||||| || || ||||| ||||||||
Sbjct 321733 TCGAGGGTGATGGTCTTTCCTGTCAAGGTTTTAACAAAAATCTGCAT 321687
Score = 152 bits (168), Expect = 1e-31
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| || | |||||| || | |||| || || |||||||| || || || |||||
Sbjct 293619 CCTCCCCTGAGACGCAGCACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAGAC 293560
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || |||||||| ||||||||||||||||| | || || || || || ||
Sbjct 293559 AGGGTGCGGCCATCTTCTAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 293500
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || ||||| || || || || || |||||||| || || | || |||||
Sbjct 293499 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTTTCAATGGTGTCGCTTGGCTCTACC 293440
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| |||||||| |||||||| || ||||||||
Sbjct 293439 TCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 293393
Score = 152 bits (168), Expect = 1e-31
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|||||||| | |||||| || | |||| || || |||||||| || || || || ||
Sbjct 320545 CCTCCTCTAAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 320486
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || |||||||| ||||| ||||||||||| | || || || || || ||
Sbjct 320485 AGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 320426
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || ||||| || || || || ||||| ||||| || || | || |||||
Sbjct 320425 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACC 320366
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | ||||| ||||| |||||||| || |||||||| ||||||||
Sbjct 320365 TCGAGGGTTATGGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 320319
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| || | ||||| || | |||| || || |||||||| || || || |||||
Sbjct 320773 CCTCCCCTGAGACGCAACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 320714
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || |||||||| ||||| ||||||||||||| || || || || || ||
Sbjct 320713 AGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATTAACCTCTGCTGGTCAGGGGGA 320654
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || ||||| || || || || ||||| ||||| || || | || |||||
Sbjct 320653 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACC 320594
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| |||||||| || |||||||| ||||||||
Sbjct 320593 TCGAGGGTGATGGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 320547
Score = 143 bits (158), Expect = 5e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||| | ||||| || | |||| || || |||||||| || || || ||||
Sbjct 294077 TACCACCTCTGAGACGCAACACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAG 294018
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | || |||||||| ||||| ||||||||||| | || || || || || |
Sbjct 294017 ACAGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGG 293958
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||| || || || || || || || || || ||||| || ||| | || ||||
Sbjct 293957 GAATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTA 293898
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | || || ||||| |||||||| |||||||| || ||||||||
Sbjct 293897 CCTCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 293849
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| || | ||||| || | |||| || || |||||||| || || || || ||
Sbjct 321685 CCTCCCCTGAGACGCAACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 321626
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || |||||||| ||||||||||||||||| | || || || || || ||
Sbjct 321625 AGGGTGCGTCCATCTTCTAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 321566
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || || || || || || || || || ||||| || ||| | || |||||
Sbjct 321565 ATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACC 321506
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | |||||| ||||| |||||||| ||||| || || ||||||||
Sbjct 321505 TCGAGAGTTATGGTCTTTCCTGTCAAGGTCTTAACGAAGATCTGCAT 321459
Score = 125 bits (138), Expect = 1e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|||||||| | |||||| || | |||| || || |||||||| || || || || ||
Sbjct 320317 CCTCCTCTAAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 320258
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || |||||||| ||||| ||||||||||| | || || || || || ||
Sbjct 320257 AGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 320198
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || || || || || || || || || ||||| || ||| | || |||||
Sbjct 320197 ATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACC 320138
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| || || | || || ||||| ||||||||
Sbjct 320137 TCGAGGGTGATGGTCTTACCAGTAAGGGTTTTGACAAAGATCTGCAT 320091
>seq10
Length=45420867
Score = 156 bits (172), Expect = 8e-33
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||||| |||||| || | ||| || || || |||||||| || || || || |
Sbjct 44693482 TACCGCCTCTCAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAGTCGG 44693423
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | || ||||| || || || ||||||||||| || | || || || || |
Sbjct 44693422 ACAGGGTGCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGTG 44693363
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || |||||||||||||| || || || || || ||||| || || | ||||| |
Sbjct 44693362 GGATGCCCTCCTTATCTTGAATTTTAGCCTTGACGTTCTCAATGGTGTCGCTTGGTTCCA 44693303
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | ||| || |||||||| |||| |||||| ||||| ||||||||
Sbjct 44693302 CCTCTAGAGTGATGGTCTTGCCGGTCAGCGTCTTCACAAAGATCTGCAT 44693254
Score = 147 bits (162), Expect = 4e-30
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||||| |||||| || | || || || || || ||||| || ||||| || |
Sbjct 44694166 TACCACCTCTCAGACGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTATAGTCGG 44694107
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | || ||||| || || || || |||||||| || | || || || || |
Sbjct 44694106 ACAGGGTGCGTCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCAGGTG 44694047
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || ||||||||||||||||| ||||| || || ||||| || ||| | || || |
Sbjct 44694046 GGATGCCCTCCTTATCTTGAATCTTGGCTTTCACGTTCTCAATGGTGTCACTGGGCTCGA 44693987
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | ||| || ||||| || |||| |||||| || || ||||||||
Sbjct 44693986 CCTCAAGAGTGATGGTCTTACCAGTCAGCGTCTTCACGAAGATCTGCAT 44693938
Score = 136 bits (150), Expect = 8e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| ||||| | || || || || |||||||| || || || || || || | | ||
Sbjct 44693696 CGGAGAACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA 44693637
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || ||||| ||||||||||| || | || || || || || || || ||||||
Sbjct 44693636 TCTTCAAGCTGTTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTA 44693577
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||||||||| ||||| || || ||||| || ||| | || || || || | ||| ||
Sbjct 44693576 TCTTGAATCTTGGCTTTCACGTTCTCAATGGTGTCACTGGGCTCGACCTCAAGAGTGATG 44693517
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || ||||||| ||||| || || ||||||||
Sbjct 44693516 GTTTTTCCTGTCAGAGTCTTGACGAAGATCTGCAT 44693482
Score = 131 bits (144), Expect = 3e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || |||||||| || || || || || || | | ||
Sbjct 44693240 CGGAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA 44693181
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| |||| ||||||||||| ||||| || | || || || ||||| || || ||||||
Sbjct 44693180 TCCTCTAACTGTTTTCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTA 44693121
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|||||||| || || || ||||| ||||| || || | || || || || | || ||
Sbjct 44693120 TCTTGAATTTTAGCCTTGACATTCTCAATGGTGTCGCTGGGCTCGACCTCGAGGGTGATG 44693061
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || |||| |||||| ||||| ||||||||
Sbjct 44693060 GTCTTACCAGTCAGCGTCTTCACAAAGATCTGCAT 44693026
Score = 129 bits (142), Expect = 1e-24
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || || | || || || | ||| || || || || ||||| || ||||| ||||
Sbjct 44693938 TACCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAG 44693879
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | || ||||| || || || || |||||||| || | || || || || |
Sbjct 44693878 ACAGGGTGCGCCCATCTTCAAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGTG 44693819
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || |||||||||||||| || || || || || ||||| || || | || || |
Sbjct 44693818 GGATGCCCTCCTTATCTTGAATTTTAGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCGA 44693759
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||||||| || || || || |||| |||||| || || ||||||||
Sbjct 44693758 CCTCCAAAGTGATGGTTTTTCCAGTCAGCGTCTTCACGAAGATCTGCAT 44693710
>seq5
Length=72500376
Score = 152 bits (168), Expect = 1e-31
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| || | |||||| || | |||| || || |||||||| || || || |||||
Sbjct 42067401 CCTCCCCTGAGACGCAGCACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAGAC 42067342
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || |||||||| ||||||||||||||||| | || || || || || ||
Sbjct 42067341 AGGGTGCGGCCATCTTCTAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42067282
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || ||||| || || || || || |||||||| || || | || |||||
Sbjct 42067281 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTTTCAATGGTGTCGCTTGGCTCTACC 42067222
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| |||||||| |||||||| || ||||||||
Sbjct 42067221 TCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 42067175
Score = 152 bits (168), Expect = 1e-31
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| || | |||||| || | |||| || || |||||||| || || || ||||||
Sbjct 42095462 CCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAT 42095403
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || |||||||| ||||| ||||||||||| | || || || || || ||
Sbjct 42095402 AGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42095343
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || ||||| || || || || ||||| ||||| || || | || |||||
Sbjct 42095342 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACC 42095283
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| |||||||| || |||||||| ||||||||
Sbjct 42095282 TCGAGGGTGATGGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 42095236
Score = 152 bits (168), Expect = 1e-31
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||||| | |||||| || | ||||| |||||| |||||||| || || ||||||||
Sbjct 42096146 CCTCCTCGGAGACGCAGCACAAGGTGCAAAGTAGACTCTTTCTGGATGTTGTAATCAGAC 42096087
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | || |||||||| ||||| ||||||||||| | || || || || || ||
Sbjct 42096086 AAGGTGCGGCCATCTTCTAGCTGTTTACCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42096027
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || || || || || || || ||||| ||||| || || | || |||||
Sbjct 42096026 ATGCCTTCTTTGTCCTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACC 42095967
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| |||||||| ||||| || || ||||||||
Sbjct 42095966 TCAAGGGTGATGGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 42095920
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|||||||| | |||||| || | |||| || || |||||||| || || || || ||
Sbjct 42094778 CCTCCTCTAAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 42094719
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || |||||||| ||||| ||||||||||| | || || || || || ||
Sbjct 42094718 AGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42094659
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || || || || || || || ||||| ||||| || || | || |||||
Sbjct 42094658 ATGCCTTCTTTGTCCTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACC 42094599
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| |||||||| || |||||||| ||||||||
Sbjct 42094598 TCGAGGGTGATGGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 42094552
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| || | ||||| || | |||| || || |||||||| || || || || ||
Sbjct 42095690 CCTCCCCTGAGACGCAACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 42095631
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || |||||||| ||||||||||||||||| | || || || || || ||
Sbjct 42095630 AGGGTGCGTCCATCTTCTAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42095571
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || || || || || || || || || ||||| || ||| | || |||||
Sbjct 42095570 ATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACC 42095511
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | |||||| ||||| |||||||| ||||| || || ||||||||
Sbjct 42095510 TCGAGAGTTATGGTCTTTCCTGTCAATGTCTTAACGAAGATCTGCAT 42095464
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| || | |||||| || | |||| || || |||||||| || || || || ||
Sbjct 42095006 CCTCCCCTAAGACGCAGCACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCGGAC 42094947
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||||| ||||||||||||||||| | || || || || || ||
Sbjct 42094946 AGGGTGCGGCCATCTTCTAACTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42094887
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || ||||| || || || || || || ||||| || || | || |||||
Sbjct 42094886 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCTACC 42094827
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| |||||||| || |||||||| ||||||||
Sbjct 42094826 TCGAGGGTGATGGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 42094780
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|||||||| | |||||| || | |||| || || |||||||| || || || || ||
Sbjct 42095234 CCTCCTCTAAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 42095175
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || |||||||| ||||| ||||||||||| | || || || || || ||
Sbjct 42095174 AGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42095115
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || || || || || || || ||||| ||||| || || | || |||||
Sbjct 42095114 ATGCCTTCTTTGTCCTGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCTACC 42095055
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| |||||||| ||||| || || ||||||||
Sbjct 42095054 TCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 42095008
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| || | |||||| || | |||| || || |||||||| || || || |||||
Sbjct 42095918 CCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 42095859
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || |||||||| ||||| ||||||||||| | || || || || || ||
Sbjct 42095858 AGGGTGCGGCCATCTTCTAGCTGTTTACCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42095799
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || ||||| || || || || || || ||||| || ||| | || || ||
Sbjct 42095798 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCGACC 42095739
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| |||||||| || || || || ||||||||
Sbjct 42095738 TCAAGGGTGATGGTCTTTCCTGTCAAGGTTTTAACGAAAATCTGCAT 42095692
Score = 129 bits (142), Expect = 1e-24
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||| | ||||| || | |||| || || |||||||| || || || ||||
Sbjct 42068315 TACCACCTCTGAGACGCAACACCAGATGCAATGTGGACTCTTTCTGGATGTTGTAGTCAG 42068256
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | || ||||| || ||||| ||||||||||| | || || || || || |
Sbjct 42068255 ACAAGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGG 42068196
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||| || || || || || || || || || ||||| || || | || ||||
Sbjct 42068195 GAATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCTA 42068136
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | || || ||||| |||||||| |||||||| || ||||||||
Sbjct 42068135 CCTCGAGGGTGATGGTCTTTCCTGTCAAGGTCTTTACGAAGATCTGCAT 42068087
Score = 125 bits (138), Expect = 1e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|||||||| | |||||| || | |||| || || |||||||| || || || || ||
Sbjct 42094550 CCTCCTCTAAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 42094491
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || |||||||| ||||| ||||||||||| | || || || || || ||
Sbjct 42094490 AGGGTGCGGCCATCTTCTAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 42094431
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || ||||| || || || || || || ||||| || ||| | || |||||
Sbjct 42094430 ATGCCTTCTTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTTGGCTCTACC 42094371
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || || || || || | || || ||||| ||||||||
Sbjct 42094370 TCGAGGGTGATGGTTTTACCAGTAAGGGTTTTGACAAAGATCTGCAT 42094324
>seq16
Length=55266484
Score = 91.5 bits (100), Expect = 3e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 60155 TGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCATACTTAGG 60214
|||||||| | || |||||||| | || || | || |||||||||||||| | |
Sbjct 5163132 TGGTGGTATTTCATCTCTAAAGGCGTTGAGTATCTGGACACGGTGTTTTTCATTTTACGC 5163191
Query 60215 AAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGTTTACTTTA 60274
|| |||||||| ||| | || || | ||||| ||||| || | |||||||| || |
Sbjct 5163192 AAGAAGTTTAACCAGATCAGCTTCCTGCACGTCTATCACCACTGCACTATGTTCACCCTC 5163251
Query 60275 GGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCA 60309
| ||| | ||||| |||||| ||||||| || ||
Sbjct 5163252 TGGTGGATCGGCATCAAATGGGTTGCCGGCGGCCA 5163286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981803009311897
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |