Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09] 1,923 sequences; 1,679,203,469 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq16 84.2 4e-11 >seq16 Length=55266484 Score = 84.2 bits (92), Expect = 4e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 |||||||| | || |||||||| | || || | || || ||||||||||| | | Sbjct 5163132 TGGTGGTATTTCATCTCTAAAGGCGTTGAGTATCTGGACACGGTGTTTTTCATTTTACGC 5163191 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504 || |||||||| || | ||||| || ||||| ||||| || | |||||||| || | Sbjct 5163192 AAGAAGTTTAACCAGATCAGCTTCCTGCACGTCTATCACCACTGCACTATGTTCACCCTC 5163251 Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 | ||| | || || |||||| |||| || || ||| Sbjct 5163252 TGGTGGATCGGCATCAAATGGGTTGCCGGCGGCCAG 5163287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903389484253280