Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09] 1,923 sequences; 1,679,203,469 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq7 107 2e-18 >seq7 Length=74282399 Score = 107 bits (118), Expect = 2e-18 Identities = 119/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 ||||||||||| || |||||||| || || || ||| || || ||||| ||||| ||| Sbjct 71539812 CCAGTGATGTGGGCGATCATGTAGGTCAGCAGGGCGTAGCTGGCGATGTTGAATGGGACA 71539753 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 || || || || |||||||||| || || ||||||||||| | | | | ||||| Sbjct 71539752 CCGAGACCGATGTCTCCCGATCGCTGGTACAGCTGACATGACAACTCACCGTTCGACACG 71539693 Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 ||||| ||||| | ||||||| || |||| |||||| Sbjct 71539692 TAAAACTGACACAACGCATGACAGGGCGGCAGCGCCATC 71539654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391936414142449