Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09] 1,923 sequences; 1,679,203,469 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq21 84.2 2e-11 >seq21 Length=45934066 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 55493 CTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCG 55552 ||||| |||| |||||||| || || || || |||||||| ||||||||||||| | Sbjct 30773459 CTGCTGCTGGCCCCAATGCCCACTGCCTCCACAGCTCAGATTCTGGGCAACAACGAATCC 30773400 Query 55553 TTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTT 55606 | ||||||||||| | |||||||||| ||| || ||| | || |||||| Sbjct 30773399 ATTGAGCCGTACACCAGCAACATCTACACCCGCAGGGTCCTGTCTGGAGAGTTT 30773346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547202846295400