Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09] 1,923 sequences; 1,679,203,469 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq16 91.5 2e-13 >seq16 Length=55266484 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 32674 TGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATAATGA 32733 |||||| ||||| ||||||||||| | || ||||| || || | || ||||| | Sbjct 5163130 TGTGGTGGTATTTCATCTCTAAAGGCGTTGAGTATCTGGACACGGTGTTTTTCATTTTAC 5163189 Query 32734 GAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTTACTT 32793 | ||||| |||||||| | ||||| ||||||| || ||||| | || ||||| || Sbjct 5163190 GCAAGAAGTTTAACCAGATCAGCTTCCTGCACGTCTATCACCACTGCACTATGTTCACCC 5163249 Query 32794 TAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAG 32831 | | ||||| || || |||||| |||| || || ||| Sbjct 5163250 TCTGGTGGATCGGCATCAAATGGGTTGCCGGCGGCCAG 5163287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603166301041520