Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09]
1,923 sequences; 1,679,203,469 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq10 147 2e-30
seq1136 141 8e-29
seq5 138 1e-27
>seq10
Length=45420867
Score = 147 bits (162), Expect = 2e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || |||||||||||| | || ||||| || ||||||||
Sbjct 44693253 CATGCAGATCTTTGTGAAGACGCTGACCGGCAAGACCATCACTCTAGAGGTGGAACCAAG 44693312
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||||| ||||| ||||||||||| || || ||||| ||||| || ||
Sbjct 44693313 CGACACCATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGCATCCCACCTGACCA 44693372
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | || ||||| || | ||||| | ||| | ||||| |||||
Sbjct 44693373 GCAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACCCTGTCCGACTACAA 44693432
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| || ||||| ||| | || |||| ||||| || | || || ||
Sbjct 44693433 CATTCAGAAAGAGTCCACCCTCCACCTGGTGCTGCGTCTGAGAGGCGGTAT 44693483
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||| || ||| | || || || || || || || |
Sbjct 44693026 ATGCAGATCTTTGTGAAGACGCTGACTGGTAAGACCATCACCCTCGAGGTCGAGCCCAGC 44693085
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| ||||| ||||||||||| || || ||||| || || || ||
Sbjct 44693086 GACACCATTGAGAATGTCAAGGCTAAAATTCAAGATAAGGAGGGCATTCCTCCTGACCAG 44693145
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || ||||| || || || | ||| | ||||| ||||||
Sbjct 44693146 CAGCGTCTGATCTTCGCTGGAAAACAGTTAGAGGATGGACGCACCCTGTCCGACTACAAC 44693205
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||| ||| | || |||| | || | ||||||||||
Sbjct 44693206 ATCCAGAAAGAGTCCACCCTCCACCTGGTGCTCCGCCTCAGGGGTGGCAT 44693255
Score = 107 bits (118), Expect = 2e-18
Identities = 164/234 (70%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043
|| ||||||||| || || || || ||||| || || | || ||| | || || || ||
Sbjct 44693706 CGGCATGCAGATCTTCGTGAAGACGCTGACTGGAAAAACCATCACTTTGGAGGTCGAGCC 44693765
Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103
|||| | ||||||| ||||| ||||||||||| || || ||||| ||||| ||
Sbjct 44693766 CAGCGACACCATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGCATCCCACCTGA 44693825
Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163
|| |||||| | || | |||||||| || | ||||| | ||| | || || ||
Sbjct 44693826 CCAGCAGCGTCTTATCTTTGCCGGCAAGCAGCTTGAAGATGGGCGCACCCTGTCTGACTA 44693885
Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || |||||||| ||| | || |||| | || | ||||||| ||
Sbjct 44693886 TAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTCAGGGGTGGTAT 44693939
>seq1136
Length=355867
Score = 141 bits (156), Expect = 8e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||||||||| |||| || ||| | || || || || || || ||
Sbjct 320546 CATGCAGATCTTTGTAAAAACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 320605
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||||| ||||| ||||| ||||||||||||||||| || || || ||
Sbjct 320606 CGACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCA 320665
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | ||||| | || |||||||| | ||||| | ||| | || || |||||
Sbjct 320666 GCAGAGGTTAATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAA 320725
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| ||||| ||| |||| |||||| | |||| || ||
Sbjct 320726 CATCCAGAAAGAGTCCACCTTGCATCTGGTGTTGCGTCTCAGGGGAGGGAT 320776
Score = 141 bits (156), Expect = 8e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||||||||| |||| || ||| | || || || || || || ||
Sbjct 321230 CATGCAGATCTTTGTAAAAACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 321289
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||||| ||||| ||||| ||||||||||||||||| || || || ||
Sbjct 321290 CGACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCA 321349
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | ||||||||||| | ||||| | ||| | || || |||||
Sbjct 321350 GCAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAA 321409
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| ||||| ||| |||| ||||| | |||| |||||
Sbjct 321410 CATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTCAGGGGAGGCAT 321460
Score = 138 bits (152), Expect = 1e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||||||||| |||| || ||| | || || || || || || ||
Sbjct 320318 CATGCAGATCTTTGTAAAAACCTTGACAGGAAAGACCATAACCCTCGAGGTAGAGCCAAG 320377
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||||| ||||| ||||| ||||||||||||||||| || || || ||
Sbjct 320378 CGACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCA 320437
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || |||||||| | ||||| | ||| | ||||| |||||
Sbjct 320438 GCAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTGTCCGACTACAA 320497
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| ||||| ||| |||| ||||| | | || |||||
Sbjct 320498 CATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTTAGAGGAGGCAT 320548
Score = 138 bits (152), Expect = 1e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||| || ||| | || ||||| || || || ||
Sbjct 321002 CATGCAGATCTTCGTTAAGACCTTGACAGGAAAGACCATAACTCTCGAGGTAGAGCCAAG 321061
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||||| ||||| ||||| ||||||||||||||||| || || || ||
Sbjct 321062 CGACACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCA 321121
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || |||||||| | ||||| | ||| | ||||| |||||
Sbjct 321122 GCAGAGATTGATTTTTGCTGGCAAACAGCTAGAAGATGGACGCACCCTGTCCGACTACAA 321181
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| ||||| ||| |||| |||||| | |||| |||||
Sbjct 321182 CATCCAGAAAGAGTCCACCTTGCATCTGGTGTTGCGTCTCAGGGGAGGCAT 321232
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || || ||| | || || ||||| || || ||
Sbjct 293165 ATGCAGATCTTCGTCAAGACCCTTACTGGTAAGACCATCACCCTTGAGGTCGAGCCAAGT 293224
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| ||||| ||||| || |||||||||||||| || || || ||
Sbjct 293225 GACACCATTGAGAATGTCAAGGCTAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 293284
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||||||||| | ||||| | ||| | ||||| ||||||
Sbjct 293285 CAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGCCGCACCCTGTCCGACTACAAC 293344
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||| ||||| ||| |||| |||||| | |||| |||||
Sbjct 293345 ATCCAGAAAGAGTCCACCTTGCATCTGGTGTTGCGTCTCAGGGGAGGCAT 293394
Score = 129 bits (142), Expect = 5e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || || || || ||| | || || ||||| || || ||
Sbjct 293620 CATGCAGATCTTCGTCAAGACCCTTACTGGTAAGACCATCACCCTTGAGGTCGAGCCAAG 293679
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||||| ||||| ||||| || |||||||||||||| || || || ||
Sbjct 293680 TGACACCATTGAGAATGTCAAGGCTAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 293739
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | ||||||||||| | ||||| | ||| | ||||| |||||
Sbjct 293740 GCAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGACGCACCCTGTCCGACTACAA 293799
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| ||||| ||| |||| ||||| | |||| |||||
Sbjct 293800 CATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTCAGGGGAGGCAT 293850
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||| || ||| | || ||||| || || || ||
Sbjct 321458 CATGCAGATCTTCGTTAAGACCTTGACAGGAAAGACCATAACTCTCGAGGTAGAGCCAAG 321517
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||||| ||||| ||||| || |||||||||||||| || || || ||
Sbjct 321518 TGACACCATTGAGAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 321577
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || || ||||| | ||||| | ||| | ||||| |||||
Sbjct 321578 GCAGAGGTTGATCTTTGCTGGAAAACAGCTAGAAGATGGACGCACCCTGTCCGACTACAA 321637
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| ||||| ||| |||| |||||| | |||| |||||
Sbjct 321638 CATCCAGAAAGAGTCCACCTTGCATCTGGTGTTGCGTCTCAGGGGAGGCAT 321688
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| ||||| || || || ||| | || || || || || || ||
Sbjct 320091 ATGCAGATCTTTGTCAAAACCCTTACTGGTAAGACCATCACCCTCGAGGTAGAGCCAAGT 320150
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| ||||| ||||| || |||||||||||||| || || || ||
Sbjct 320151 GACACCATTGAGAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 320210
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || |||||||| | ||||| | ||| | ||||| ||||||
Sbjct 320211 CAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTGTCCGACTACAAC 320270
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||| ||||| ||| |||| ||||| | | || |||||
Sbjct 320271 ATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTTAGAGGAGGCAT 320320
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||| || ||| | || || || || || || ||
Sbjct 320775 ATGCAGATCTTCGTTAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAGT 320834
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| ||||| ||||| ||||||||||||||||| || || || ||
Sbjct 320835 GACACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCAG 320894
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||||||||| | ||||| | ||| | || || ||||||
Sbjct 320895 CAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAAC 320954
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||| ||||| ||| |||| ||||| | |||| |||||
Sbjct 320955 ATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTCAGGGGAGGCAT 321004
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || ||||| || |||| || ||| | || || || || || || ||
Sbjct 293392 CATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 293451
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||| | ||||| ||||| ||||||||||||||||| || || || ||
Sbjct 293452 CGACACCATTGAAAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCA 293511
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || || ||||| | ||||| | ||| | || || |||||
Sbjct 293512 GCAGAGGTTGATCTTTGCTGGAAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAA 293571
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| || || ||| |||| ||||| | |||| |||||
Sbjct 293572 CATCCAGAAAGAGTCCACATTGCATCTGGTGCTGCGTCTCAGGGGAGGCAT 293622
Score = 114 bits (126), Expect = 1e-20
Identities = 167/236 (71%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || ||||| || |||| || ||| | || || || || || || ||
Sbjct 293848 CATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 293907
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||||| ||||| ||||| || |||||||||||||| || || || ||
Sbjct 293908 TGACACCATTGAGAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 293967
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || |||||||| | ||||| | ||| | || || |||||
Sbjct 293968 GCAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAA 294027
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAA 27222
||| || || ||||| || || ||| |||| |||||| | | ||||| | || ||
Sbjct 294028 CATCCAGAAAGAGTCCACATTGCATCTGGTGTTGCGTCTCAGAGGTGGTACAAAAA 294083
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| ||||| |||| || ||| | || || || || || || ||
Sbjct 321686 CATGCAGATTTTTGTTAAAACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 321745
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||||| ||||| ||||| ||||||||||||||||| || || || ||
Sbjct 321746 TGACACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCA 321805
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || || ||||| | ||||| | ||| | || || |||||
Sbjct 321806 GCAGAGGTTGATCTTTGCTGGTAAACAGCTAGAAGATGGCCGAACCCTGTCTGACTACAA 321865
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||| || || ||||| || || || | || ||||| | || || |||
Sbjct 321866 CATCCAGAAAGAGTCTACTTTGCACCTTGTGCTGCGTCTCCGAGGAGGC 321914
>seq5
Length=72500376
Score = 138 bits (152), Expect = 1e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||||||||| |||| || ||| | || || || || || || ||
Sbjct 42094779 CATGCAGATCTTTGTAAAAACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 42094838
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||||| ||||| ||||| ||||||||||||||||| || || || ||
Sbjct 42094839 CGACACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCA 42094898
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || || ||||| || ||||| | ||| | ||||| |||||
Sbjct 42094899 GCAGAGGTTGATCTTTGCTGGAAAACAGTTAGAAGATGGCCGCACCCTGTCCGACTACAA 42094958
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| || || ||| |||| ||||| | |||| |||||
Sbjct 42094959 CATCCAGAAAGAGTCCACATTGCATCTGGTGCTGCGTCTTAGGGGAGGCAT 42095009
Score = 138 bits (152), Expect = 1e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||||||||| |||| || ||| | || || || || || || ||
Sbjct 42095235 CATGCAGATCTTTGTAAAAACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 42095294
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||||| ||||| ||||| ||||||||||||||||| || || || ||
Sbjct 42095295 CGACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCA 42095354
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || |||||||| | ||||| | ||| | || || |||||
Sbjct 42095355 GCAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTATCTGACTACAA 42095414
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| ||||| ||| |||| ||||| | |||| |||||
Sbjct 42095415 CATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTCAGGGGAGGCAT 42095465
Score = 132 bits (146), Expect = 4e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || ||||| || |||| || ||| | || || || || || || ||
Sbjct 42067630 CATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 42067689
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||||| ||||| ||||| || |||||||||||||| || || || ||
Sbjct 42067690 CGACACCATTGAGAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 42067749
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | |||||||| || | ||||| | ||| | ||||| |||||
Sbjct 42067750 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACCCTCTCCGACTACAA 42067809
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| ||||| ||| |||| |||||| | |||| |||||
Sbjct 42067810 CATCCAGAAAGAGTCCACCTTGCATCTGGTGTTGCGTCTCAGGGGAGGCAT 42067860
Score = 132 bits (146), Expect = 4e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||||||||| |||| || ||| | || || || || || || ||
Sbjct 42094551 CATGCAGATCTTTGTAAAAACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 42094610
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||||| ||||| ||||| || |||||||||||||| || || || ||
Sbjct 42094611 CGACACCATTGAGAATGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 42094670
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || |||||||| | ||||| | ||| | ||||| |||||
Sbjct 42094671 GCAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGACGCACCCTGTCCGACTACAA 42094730
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| ||||| ||| |||| ||||| | | || |||||
Sbjct 42094731 CATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTTAGAGGAGGCAT 42094781
Score = 129 bits (142), Expect = 5e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || || || || ||| | || || ||||| || || ||
Sbjct 42067402 CATGCAGATCTTCGTCAAGACCCTTACTGGTAAGACCATCACCCTTGAGGTCGAGCCAAG 42067461
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||||| ||||| ||||| || |||||||||||||| || || || ||
Sbjct 42067462 TGACACCATTGAGAATGTCAAGGCTAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 42067521
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | ||||||||||| | ||||| | ||| | ||||| |||||
Sbjct 42067522 GCAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGCCGCACCCTGTCCGACTACAA 42067581
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| ||||| ||| |||| ||||| | |||| |||||
Sbjct 42067582 CATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTCAGGGGAGGCAT 42067632
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || || ||| | || || ||||| || || ||
Sbjct 42066947 ATGCAGATCTTCGTCAAGACCCTTACTGGTAAGACCATCACCCTTGAGGTCGAGCCAAGT 42067006
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| ||||| ||||| || |||||||||||||| || || || ||
Sbjct 42067007 GACACCATTGAGAATGTCAAGGCTAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 42067066
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||||||||| | ||||| | ||| | ||||| ||||||
Sbjct 42067067 CAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGCCGCACCCTGTCCGACTACAAC 42067126
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||| || || ||| |||| |||||| | |||| |||||
Sbjct 42067127 ATCCAGAAAGAGTCCACATTGCATCTGGTGTTGCGTCTCAGGGGAGGCAT 42067176
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || ||||| || |||| || ||| | || || || || || || ||
Sbjct 42067858 CATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTCGAGCCAAG 42067917
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||||| ||||| ||||| || |||||||||||||| || || || ||
Sbjct 42067918 TGACACCATTGAGAATGTCAAGGCTAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 42067977
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | ||||||||||| | ||||| | ||| | || || |||||
Sbjct 42067978 GCAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAA 42068037
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| ||||| ||| |||| ||||| | |||| |||||
Sbjct 42068038 CATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTCAGGGGAGGCAT 42068088
Score = 123 bits (136), Expect = 2e-23
Identities = 169/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || ||||| || |||| || ||| | || || || || || || ||
Sbjct 42068086 CATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 42068145
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||||| ||||| ||||| || |||||||||||||| || || || ||
Sbjct 42068146 CGACACCATTGAGAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 42068205
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || |||||||| ||||||| | ||| | || || |||||
Sbjct 42068206 GCAGAGGTTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCTTGTCTGACTACAA 42068265
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAA 27222
||| || || ||||| || || ||| |||| |||||| | | ||||| | || ||
Sbjct 42068266 CATCCAGAAAGAGTCCACATTGCATCTGGTGTTGCGTCTCAGAGGTGGTACAAAAA 42068321
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||| || ||| | || ||||| || || || ||
Sbjct 42095463 CATGCAGATCTTCGTTAAGACATTGACAGGAAAGACCATAACTCTCGAGGTAGAGCCAAG 42095522
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||||| ||||| ||||| || |||||||||||||| || || || ||
Sbjct 42095523 TGACACCATTGAGAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 42095582
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || || ||||| | ||||| | ||| | ||||| |||||
Sbjct 42095583 GCAGAGGTTGATCTTTGCTGGAAAACAGCTAGAAGATGGACGCACCCTGTCCGACTACAA 42095642
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| ||||| ||| |||| |||||| | |||| |||||
Sbjct 42095643 CATCCAGAAAGAGTCCACCTTGCATCTGGTGTTGCGTCTCAGGGGAGGCAT 42095693
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || ||||| |||| || ||| | || || ||||| || || ||
Sbjct 42095691 CATGCAGATTTTCGTTAAAACCTTGACAGGAAAGACCATCACCCTTGAGGTCGAGCCAAG 42095750
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||||| ||||| ||||| ||||||||||||||||| || || || ||
Sbjct 42095751 TGACACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCA 42095810
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || || ||||| | ||||| | ||| | || || |||||
Sbjct 42095811 GCAGAGGTTGATCTTTGCTGGTAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAA 42095870
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| ||||| ||| |||| ||||| | |||| |||||
Sbjct 42095871 CATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTCAGGGGAGGCAT 42095921
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| ||||| || || || || | || || || || || || ||
Sbjct 42094324 ATGCAGATCTTTGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAGGTAGAGCCAAGT 42094383
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| ||||| ||||| ||||||||||||||||| || || || ||
Sbjct 42094384 GACACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCAG 42094443
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || |||||||| | ||||| | ||| | ||||| ||||||
Sbjct 42094444 CAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTGTCCGACTACAAC 42094503
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||| ||||| ||| |||| ||||| | | || |||||
Sbjct 42094504 ATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTTAGAGGAGGCAT 42094553
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||| || ||| | || || || || || || ||
Sbjct 42095007 CATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 42095066
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||||| ||||| ||||| || |||||||||||||| || || || ||
Sbjct 42095067 CGACACCATTGAGAATGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 42095126
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || |||||||| | ||||| | ||| | ||||| |||||
Sbjct 42095127 GCAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTGTCCGACTACAA 42095186
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| ||||| ||| |||| ||||| | | || |||||
Sbjct 42095187 CATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTTAGAGGAGGCAT 42095237
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || ||||| || |||| || ||| | || || || || || || ||
Sbjct 42067174 CATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAG 42067233
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||| | ||||| ||||| ||||||||||||||||| || || || ||
Sbjct 42067234 CGACACCATTGAAAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCA 42067293
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || || ||||| | ||||| | ||| | || || |||||
Sbjct 42067294 GCAGAGGTTGATCTTTGCTGGAAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAA 42067353
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| || || ||| |||| ||||| | |||| |||||
Sbjct 42067354 CATCCAGAAAGAGTCCACATTGCATCTGGTGCTGCGTCTCAGGGGAGGCAT 42067404
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||| || ||| | || || ||||| || || ||
Sbjct 42095919 CATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACCATCACCCTTGAGGTAGAGCCAAG 42095978
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||||| ||||| ||||| || |||||||||||||| || || || ||
Sbjct 42095979 CGACACCATTGAGAATGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCA 42096038
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || || ||||| | ||||| | ||| | || ||||||||
Sbjct 42096039 GCAGAGGTTGATCTTTGCTGGTAAACAGCTAGAAGATGGCCGCACCTTGTCTGATTACAA 42096098
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||| || || ||||| || || || | || ||||| | || || |||
Sbjct 42096099 CATCCAGAAAGAGTCTACTTTGCACCTTGTGCTGCGTCTCCGAGGAGGC 42096147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434907945648960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |