Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09] 1,923 sequences; 1,679,203,469 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq24 93.3 3e-14 >seq24 Length=42172926 Score = 93.3 bits (102), Expect = 3e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 3251 GATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAGTTTGGT 3310 || |||||||| |||| || || ||||||||||| || |||| ||||| ||||||||| Sbjct 28228493 GAAGAGCTCTTTAGAGACGGAGTGAACTGGGGGCGGATCATTGCATTCTTCGAGTTTGGT 28228434 Query 3311 GGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAACATTGCC 3370 || ||||| |||||||||||||| | | || | |||| || || || ||||| Sbjct 28228433 GGGACCATGTGCGTGGAAAGCGTCAACCGGGAGATGGCGTCCCAGGTAGATAATATTGCA 28228374 Query 3371 GCGTGGATGACAGACCAGCTG 3391 |||||||| ||| | ||| Sbjct 28228373 CACTGGATGACTGACTACCTG 28228353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414467086088572