Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09]
1,923 sequences; 1,679,203,469 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1136 116 3e-21
seq5 116 3e-21
seq10 113 3e-20
>seq1136
Length=355867
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| |||||||| ||| | || ||||| || || |||||||| || || | |
Sbjct 321003 ATGCAGATCTTCGTTAAGACCTTGACAGGAAAGACCATAACTCTCGAGGTAGAGCCAAGC 321062
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || ||||| ||||||||||| | || || || ||
Sbjct 321063 GACACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCAG 321122
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || ||||| |||||||| || ||||| | |||||| | ||| ||||||
Sbjct 321123 CAGAGATTGATTTTTGCTGGCAAACAGCTAGAAGATGGACGCACCCTGTCCGACTACAAC 321182
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
|| || ||||||||||| || ||| | || ||
Sbjct 321183 ATCCAGAAAGAGTCCACCTTGCATCTGGTGTT 321214
Score = 114 bits (126), Expect = 9e-21
Identities = 150/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || || || || ||||| || || || || | |
Sbjct 293621 ATGCAGATCTTCGTCAAGACCCTTACTGGTAAGACCATCACCCTTGAGGTCGAGCCAAGT 293680
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | |||| | ||||||||||| | || || || ||
Sbjct 293681 GACACCATTGAGAATGTCAAGGCTAAAA-TCCAGGACAAAGAAGGCATTCCCCCTGACCA 293739
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || |||||||||||||| || ||||| | |||||| | ||| |||||
Sbjct 293740 GCAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGACGCACCCTGTCCGACTACAA 293799
Query 23790 CATACAAAAAGAGTCCACATTACAT 23814
||| || ||||||||||| || |||
Sbjct 293800 CATCCAGAAAGAGTCCACCTTGCAT 293824
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| |||||||| ||| | || ||||| || || |||||||| || || | |
Sbjct 321459 ATGCAGATCTTCGTTAAGACCTTGACAGGAAAGACCATAACTCTCGAGGTAGAGCCAAGT 321518
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || ||||| ||||||||||| | || || || ||
Sbjct 321519 GACACCATTGAGAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 321578
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || ||||| || ||||| || ||||| | |||||| | ||| ||||||
Sbjct 321579 CAGAGGTTGATCTTTGCTGGAAAACAGCTAGAAGATGGACGCACCCTGTCCGACTACAAC 321638
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
|| || ||||||||||| || ||| | || ||
Sbjct 321639 ATCCAGAAAGAGTCCACCTTGCATCTGGTGTT 321670
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || || || || ||||| || || || || | |
Sbjct 293165 ATGCAGATCTTCGTCAAGACCCTTACTGGTAAGACCATCACCCTTGAGGTCGAGCCAAGT 293224
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | |||| | ||||||||||| | || || || ||
Sbjct 293225 GACACCATTGAGAATGTCAAGGCTAAAA-TCCAGGACAAAGAAGGCATTCCCCCTGACCA 293283
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || |||||||||||||| || ||||| | ||||| | ||| |||||
Sbjct 293284 GCAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGCCGCACCCTGTCCGACTACAA 293343
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
||| || ||||||||||| || ||| | || ||
Sbjct 293344 CATCCAGAAAGAGTCCACCTTGCATCTGGTGTT 293376
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || |||||| | || ||||| || ||||| ||||| || || | |
Sbjct 320547 ATGCAGATCTTTGTAAAAACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAGC 320606
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | |||| | ||||||||||| | || || || ||
Sbjct 320607 GACACCATTGAGAATGTCAAGGCCAAAA-TCCAAGACAAAGAAGGCATTCCCCCTGACCA 320665
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | ||||| ||||| |||||||| || ||||| | ||||| | || |||||
Sbjct 320666 GCAGAGGTTAATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAA 320725
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
||| || ||||||||||| || ||| | || ||
Sbjct 320726 CATCCAGAAAGAGTCCACCTTGCATCTGGTGTT 320758
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| |||||||| ||| | || ||||| || ||||| ||||| || || | |
Sbjct 320775 ATGCAGATCTTCGTTAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAGT 320834
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || ||||| ||||||||||| | || || || ||
Sbjct 320835 GACACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCAG 320894
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || |||||||||||||| || ||||| | ||||| | || ||||||
Sbjct 320895 CAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAAC 320954
Query 23791 ATACAAAAAGAGTCCACATTACAT 23814
|| || ||||||||||| || |||
Sbjct 320955 ATCCAGAAAGAGTCCACCTTGCAT 320978
Score = 111 bits (122), Expect = 1e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || |||||| | || ||||| || ||||| ||||| || || | |
Sbjct 321231 ATGCAGATCTTTGTAAAAACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAGC 321290
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | |||| | ||||||||||| | || || || ||
Sbjct 321291 GACACCATTGAGAATGTCAAGGCCAAAA-TCCAAGACAAAGAAGGCATTCCCCCTGACCA 321349
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || |||||||||||||| || ||||| | ||||| | || |||||
Sbjct 321350 GCAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAA 321409
Query 23790 CATACAAAAAGAGTCCACATTACAT 23814
||| || ||||||||||| || |||
Sbjct 321410 CATCCAGAAAGAGTCCACCTTGCAT 321434
Score = 107 bits (118), Expect = 1e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||| | || ||||| || ||||| ||||| || || | |
Sbjct 293393 ATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAGC 293452
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||||| | || ||||| ||||||||||| | || || || ||
Sbjct 293453 GACACCATTGAAAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCAG 293512
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || ||||| || ||||| || ||||| | ||||| | || ||||||
Sbjct 293513 CAGAGGTTGATCTTTGCTGGAAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAAC 293572
Query 23791 ATACAAAAAGAGTCCACATTACAT 23814
|| || |||||||||||||| |||
Sbjct 293573 ATCCAGAAAGAGTCCACATTGCAT 293596
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||| | || ||||| || ||||| ||||| || || | |
Sbjct 293849 ATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAGT 293908
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || ||||| ||||||||||| | || || || ||
Sbjct 293909 GACACCATTGAGAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 293968
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || ||||| |||||||| || ||||| | ||||| | || ||||||
Sbjct 293969 CAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAAC 294028
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
|| || |||||||||||||| ||| | || ||
Sbjct 294029 ATCCAGAAAGAGTCCACATTGCATCTGGTGTT 294060
Score = 107 bits (118), Expect = 1e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || |||||||| || || || || ||||| ||||| || || | |
Sbjct 320091 ATGCAGATCTTTGTCAAAACCCTTACTGGTAAGACCATCACCCTCGAGGTAGAGCCAAGT 320150
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || ||||| ||||||||||| | || || || ||
Sbjct 320151 GACACCATTGAGAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 320210
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || ||||| |||||||| || ||||| | ||||| | ||| ||||||
Sbjct 320211 CAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTGTCCGACTACAAC 320270
Query 23791 ATACAAAAAGAGTCCACATTACAT 23814
|| || ||||||||||| || |||
Sbjct 320271 ATCCAGAAAGAGTCCACCTTGCAT 320294
Score = 105 bits (116), Expect = 5e-18
Identities = 148/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || |||||| | || ||||| || || || ||||| || || | |
Sbjct 320319 ATGCAGATCTTTGTAAAAACCTTGACAGGAAAGACCATAACCCTCGAGGTAGAGCCAAGC 320378
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | |||| | ||||||||||| | || || || ||
Sbjct 320379 GACACCATTGAGAATGTCAAGGCCAAAA-TCCAAGACAAAGAAGGCATTCCCCCTGACCA 320437
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||| |||||||| || ||||| | ||||| | ||| |||||
Sbjct 320438 GCAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTGTCCGACTACAA 320497
Query 23790 CATACAAAAAGAGTCCACATTACAT 23814
||| || ||||||||||| || |||
Sbjct 320498 CATCCAGAAAGAGTCCACCTTGCAT 320522
Score = 98.7 bits (108), Expect = 7e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| ||||||||| | || ||||| || ||||| ||||| || || | |
Sbjct 321687 ATGCAGATTTTTGTTAAAACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAGT 321746
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || ||||| ||||||||||| | || || || ||
Sbjct 321747 GACACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCAG 321806
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || ||||| || ||||| || ||||| | || || | || ||||||
Sbjct 321807 CAGAGGTTGATCTTTGCTGGTAAACAGCTAGAAGATGGCCGAACCCTGTCTGACTACAAC 321866
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGATCAG 23842
|| || |||||||| || || || | || | | | |||||||| ||||
Sbjct 321867 ATCCAGAAAGAGTCTACTTTGCACCTTGTGCTGCGTCTCCGAGGAGGCTCAG 321918
>seq5
Length=72500376
Score = 116 bits (128), Expect = 3e-21
Identities = 155/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || || || || ||||| || || || || | |
Sbjct 42066947 ATGCAGATCTTCGTCAAGACCCTTACTGGTAAGACCATCACCCTTGAGGTCGAGCCAAGT 42067006
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | |||| | ||||||||||| | || || || ||
Sbjct 42067007 GACACCATTGAGAATGTCAAGGCTAAAA-TCCAGGACAAAGAAGGCATTCCCCCTGACCA 42067065
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || |||||||||||||| || ||||| | ||||| | ||| |||||
Sbjct 42067066 GCAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGCCGCACCCTGTCCGACTACAA 42067125
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
||| || |||||||||||||| ||| | || ||
Sbjct 42067126 CATCCAGAAAGAGTCCACATTGCATCTGGTGTT 42067158
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||| | || ||||| || ||||| ||||| || || | |
Sbjct 42068087 ATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAGC 42068146
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || ||||| ||||||||||| | || || || ||
Sbjct 42068147 GACACCATTGAGAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 42068206
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || ||||| |||||||| |||||||| | ||||| || || ||||||
Sbjct 42068207 CAGAGGTTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCTTGTCTGACTACAAC 42068266
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
|| || |||||||||||||| ||| | || ||
Sbjct 42068267 ATCCAGAAAGAGTCCACATTGCATCTGGTGTT 42068298
Score = 114 bits (126), Expect = 9e-21
Identities = 150/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || |||||| | || ||||| || ||||| ||||| || || | |
Sbjct 42094552 ATGCAGATCTTTGTAAAAACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAGC 42094611
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | |||| | ||||||||||| | || || || ||
Sbjct 42094612 GACACCATTGAGAATGTCAAGGCCAAAA-TCCAGGACAAAGAAGGCATTCCCCCTGACCA 42094670
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||| |||||||| || ||||| | |||||| | ||| |||||
Sbjct 42094671 GCAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGACGCACCCTGTCCGACTACAA 42094730
Query 23790 CATACAAAAAGAGTCCACATTACAT 23814
||| || ||||||||||| || |||
Sbjct 42094731 CATCCAGAAAGAGTCCACCTTGCAT 42094755
Score = 111 bits (122), Expect = 1e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || || || || ||||| || || || || | |
Sbjct 42067403 ATGCAGATCTTCGTCAAGACCCTTACTGGTAAGACCATCACCCTTGAGGTCGAGCCAAGT 42067462
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | |||| | ||||||||||| | || || || ||
Sbjct 42067463 GACACCATTGAGAATGTCAAGGCTAAAA-TCCAGGACAAAGAAGGCATTCCCCCTGACCA 42067521
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || |||||||||||||| || ||||| | ||||| | ||| |||||
Sbjct 42067522 GCAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGCCGCACCCTGTCCGACTACAA 42067581
Query 23790 CATACAAAAAGAGTCCACATTACAT 23814
||| || ||||||||||| || |||
Sbjct 42067582 CATCCAGAAAGAGTCCACCTTGCAT 42067606
Score = 111 bits (122), Expect = 1e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||| | || ||||| || ||||| ||||| || || | |
Sbjct 42067859 ATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTCGAGCCAAGT 42067918
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | |||| | ||||||||||| | || || || ||
Sbjct 42067919 GACACCATTGAGAATGTCAAGGCTAAAA-TCCAGGACAAAGAAGGCATTCCCCCTGACCA 42067977
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || |||||||||||||| || ||||| | ||||| | || |||||
Sbjct 42067978 GCAGAGGTTGATCTTTGCCGGCAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAA 42068037
Query 23790 CATACAAAAAGAGTCCACATTACAT 23814
||| || ||||||||||| || |||
Sbjct 42068038 CATCCAGAAAGAGTCCACCTTGCAT 42068062
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || |||||||| || || ||||| ||||| ||||| || || | |
Sbjct 42094324 ATGCAGATCTTTGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAGGTAGAGCCAAGT 42094383
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || ||||| ||||||||||| | || || || ||
Sbjct 42094384 GACACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCAG 42094443
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || ||||| |||||||| || ||||| | ||||| | ||| ||||||
Sbjct 42094444 CAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTGTCCGACTACAAC 42094503
Query 23791 ATACAAAAAGAGTCCACATTACAT 23814
|| || ||||||||||| || |||
Sbjct 42094504 ATCCAGAAAGAGTCCACCTTGCAT 42094527
Score = 111 bits (122), Expect = 1e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||| | || ||||| || ||||| ||||| || || | |
Sbjct 42095008 ATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAGC 42095067
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | |||| | ||||||||||| | || || || ||
Sbjct 42095068 GACACCATTGAGAATGTCAAGGCCAAAA-TCCAGGACAAAGAAGGCATTCCCCCTGACCA 42095126
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||| |||||||| || ||||| | ||||| | ||| |||||
Sbjct 42095127 GCAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTGTCCGACTACAA 42095186
Query 23790 CATACAAAAAGAGTCCACATTACAT 23814
||| || ||||||||||| || |||
Sbjct 42095187 CATCCAGAAAGAGTCCACCTTGCAT 42095211
Score = 111 bits (122), Expect = 1e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || |||||| | || ||||| || ||||| ||||| || || | |
Sbjct 42095236 ATGCAGATCTTTGTAAAAACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAGC 42095295
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | |||| | ||||||||||| | || || || ||
Sbjct 42095296 GACACCATTGAGAATGTCAAGGCCAAAA-TCCAAGACAAAGAAGGCATTCCCCCTGACCA 42095354
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||| |||||||| || ||||| | ||||| || || |||||
Sbjct 42095355 GCAGAGGTTGATCTTTGCTGGCAAACAGCTAGAAGATGGCCGCACCCTATCTGACTACAA 42095414
Query 23790 CATACAAAAAGAGTCCACATTACAT 23814
||| || ||||||||||| || |||
Sbjct 42095415 CATCCAGAAAGAGTCCACCTTGCAT 42095439
Score = 107 bits (118), Expect = 1e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||| | || ||||| || ||||| ||||| || || | |
Sbjct 42067175 ATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAGC 42067234
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||||| | || ||||| ||||||||||| | || || || ||
Sbjct 42067235 GACACCATTGAAAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCAG 42067294
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || ||||| || ||||| || ||||| | ||||| | || ||||||
Sbjct 42067295 CAGAGGTTGATCTTTGCTGGAAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAAC 42067354
Query 23791 ATACAAAAAGAGTCCACATTACAT 23814
|| || |||||||||||||| |||
Sbjct 42067355 ATCCAGAAAGAGTCCACATTGCAT 42067378
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||| | || ||||| || ||||| ||||| || || | |
Sbjct 42067631 ATGCAGATCTTCGTAAAGACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAGC 42067690
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || ||||| ||||||||||| | || || || ||
Sbjct 42067691 GACACCATTGAGAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 42067750
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || ||||||||||| || || ||||| | ||||| | ||| ||||||
Sbjct 42067751 CAGAGGTTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACCCTCTCCGACTACAAC 42067810
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
|| || ||||||||||| || ||| | || ||
Sbjct 42067811 ATCCAGAAAGAGTCCACCTTGCATCTGGTGTT 42067842
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| |||||||| || | || ||||| || || |||||||| || || | |
Sbjct 42095464 ATGCAGATCTTCGTTAAGACATTGACAGGAAAGACCATAACTCTCGAGGTAGAGCCAAGT 42095523
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || ||||| ||||||||||| | || || || ||
Sbjct 42095524 GACACCATTGAGAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 42095583
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || ||||| || ||||| || ||||| | |||||| | ||| ||||||
Sbjct 42095584 CAGAGGTTGATCTTTGCTGGAAAACAGCTAGAAGATGGACGCACCCTGTCCGACTACAAC 42095643
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
|| || ||||||||||| || ||| | || ||
Sbjct 42095644 ATCCAGAAAGAGTCCACCTTGCATCTGGTGTT 42095675
Score = 107 bits (118), Expect = 1e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||||||||||||| | || ||||| || ||||| || || || || | |
Sbjct 42095692 ATGCAGATTTTCGTTAAAACCTTGACAGGAAAGACCATCACCCTTGAGGTCGAGCCAAGT 42095751
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || ||||| ||||||||||| | || || || ||
Sbjct 42095752 GACACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCAG 42095811
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || ||||| || ||||| || ||||| | ||||| | || ||||||
Sbjct 42095812 CAGAGGTTGATCTTTGCTGGTAAACAGCTAGAAGATGGCCGCACCCTGTCTGACTACAAC 42095871
Query 23791 ATACAAAAAGAGTCCACATTACAT 23814
|| || ||||||||||| || |||
Sbjct 42095872 ATCCAGAAAGAGTCCACCTTGCAT 42095895
Score = 102 bits (112), Expect = 6e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || |||||| | || ||||| || ||||| ||||| || || | |
Sbjct 42094780 ATGCAGATCTTTGTAAAAACCTTGACAGGAAAGACCATCACCCTCGAGGTAGAGCCAAGC 42094839
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || ||||| ||||||||||| | || || || ||
Sbjct 42094840 GACACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCCCCTGACCAG 42094899
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || ||||| || ||||| | ||||| | ||||| | ||| ||||||
Sbjct 42094900 CAGAGGTTGATCTTTGCTGGAAAACAGTTAGAAGATGGCCGCACCCTGTCCGACTACAAC 42094959
Query 23791 ATACAAAAAGAGTCCACATTACAT 23814
|| || |||||||||||||| |||
Sbjct 42094960 ATCCAGAAAGAGTCCACATTGCAT 42094983
Score = 102 bits (112), Expect = 6e-17
Identities = 164/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||| | || ||||| || ||||| || || || || | |
Sbjct 42095920 ATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACCATCACCCTTGAGGTAGAGCCAAGC 42095979
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | |||| | ||||||||||| | || || || ||
Sbjct 42095980 GACACCATTGAGAATGTCAAGGCCAAAA-TCCAGGACAAAGAAGGCATTCCCCCTGACCA 42096038
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||| || ||||| || ||||| | ||||| || ||||||||
Sbjct 42096039 GCAGAGGTTGATCTTTGCTGGTAAACAGCTAGAAGATGGCCGCACCTTGTCTGATTACAA 42096098
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGATCAG 23842
||| || |||||||| || || || | || | | | |||||||| ||||
Sbjct 42096099 CATCCAGAAAGAGTCTACTTTGCACCTTGTGCTGCGTCTCCGAGGAGGCTCAG 42096151
>seq10
Length=45420867
Score = 113 bits (124), Expect = 3e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || || || |||||||| |||||||| || || || |||
Sbjct 44693482 ATGCAGATCTTCGTCAAGACTCTGACAGGAAAAACCATCACTCTTGAGGTCGAGCCCAGT 44693541
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | ||| || ||| || || || || | || || || ||
Sbjct 44693542 GACACCATTGAGAACGTGAAAGCCAAGATTCAAGATAAGGAGGGCATCCCACCTGACCAG 44693601
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || ||||| |||||||| || ||||| | |||||| | ||| ||||||
Sbjct 44693602 CAGCGTCTGATCTTTGCTGGCAAACAGCTTGAAGATGGACGCACCCTGTCCGACTACAAC 44693661
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820
|| || ||||||||||| | ||| | |||
Sbjct 44693662 ATCCAGAAAGAGTCCACCCTCCATCTTGTT 44693691
Score = 95.1 bits (104), Expect = 8e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || || || || || || |||||||| || || || |||
Sbjct 44693938 ATGCAGATCTTCGTGAAGACGCTGACTGGTAAGACCATCACTCTTGAGGTCGAGCCCAGT 44693997
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | ||| || ||| || || || || | || || || ||
Sbjct 44693998 GACACCATTGAGAACGTGAAAGCCAAGATTCAAGATAAGGAGGGCATCCCACCTGACCAG 44694057
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || ||||||||||| || || ||||| | |||||| | ||| || |||
Sbjct 44694058 CAGCGTCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGACGCACCCTGTCCGACTATAAC 44694117
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 44694118 ATCCAGAAGGAGTCCAC 44694134
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || || || || || || || |||||||| || || || | |
Sbjct 44693254 ATGCAGATCTTTGTGAAGACGCTGACCGGCAAGACCATCACTCTAGAGGTGGAACCAAGC 44693313
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || |||||| || || || || | || || || ||
Sbjct 44693314 GACACCATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGCATCCCACCTGACCAG 44693373
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || ||||| ||||| || || ||||| | |||||| | ||| ||||||
Sbjct 44693374 CAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACCCTGTCCGACTACAAC 44693433
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || |||||||||||
Sbjct 44693434 ATTCAGAAAGAGTCCAC 44693450
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || || || |||||||| |||||| | || || || |||
Sbjct 44693710 ATGCAGATCTTCGTGAAGACGCTGACTGGAAAAACCATCACTTTGGAGGTCGAGCCCAGC 44693769
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || |||||| || || || || | || || || ||
Sbjct 44693770 GACACCATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGCATCCCACCTGACCAG 44693829
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || ||||||||||| || || ||||| | ||||| | || || |||
Sbjct 44693830 CAGCGTCTTATCTTTGCCGGCAAGCAGCTTGAAGATGGGCGCACCCTGTCTGACTATAAC 44693889
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 44693890 ATCCAGAAGGAGTCCAC 44693906
Score = 86.0 bits (94), Expect = 4e-12
Identities = 141/201 (70%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| || || || || || || || || || ||||| ||||| || || ||
Sbjct 44693023 AAGATGCAGATCTTTGTGAAGACGCTGACTGGTAAGACCATCACCCTCGAGGTCGAGCCC 44693082
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| |||| ||| | || | |||| || || || || || | || || ||
Sbjct 44693083 AGCGACACCATTGAGAATGTCAAGGCTAAAA-TTCAAGATAAGGAGGGCATTCCTCCTGA 44693141
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| |||||| | || || || || ||||| | || || | |||||| | ||| ||
Sbjct 44693142 CCAGCAGCGTCTGATCTTCGCTGGAAAACAGTTAGAGGATGGACGCACCCTGTCCGACTA 44693201
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || |||||||||||
Sbjct 44693202 CAACATCCAGAAAGAGTCCAC 44693222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338001678216884
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |