Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq8 93.3 4e-14 >seq8 Length=22893611 Score = 93.3 bits (102), Expect = 4e-14 Identities = 91/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 16982 AATC-CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCG 17040 |||| |||||||||||||||| || ||||| || || |||| ||||||||| |||| Sbjct 22892203 AATCACCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGTCCGGGCATCAGGCCTCT 22892144 Query 17041 TTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGG 17096 || || | ||| || ||||| ||||| || ||||| ||||| || ||||| |||| Sbjct 22892143 CTTTTTCAGCCAGAAGATCGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGG 22892088 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || | |||||| ||||||||||| || ||||| |||||||||||||| ||||| Sbjct 22891719 ATGTAGGTGTTGATGAGGAGGCTGTACATCTCTGAGTGGATGTTCTCCATGGCGATCTGG 22891660 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCC 17347 || || || || || | ||| |||| | || |||||| | |||| || ||| Sbjct 22891659 AAACCATAGAAACACCTGGCCTCCGTCACCTGCACTTCCTGGGAGAAGCGCTCC 22891606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545438267000