Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq9 167 3e-36 >seq9 Length=16453912 Score = 167 bits (184), Expect = 3e-36 Identities = 145/180 (81%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| || |||| ||| |||| ||||||||| || || | |||||||| || ||||| Sbjct 11070865 CTTGAGTCCTGTGATGTGTGCGATCATGTAGGTAAGAAGTGCATAGCTGGCAATATTGAA 11070806 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 |||||||| || ||||| || |||||||||||||||||||| || || ||||| ||| | Sbjct 11070805 AGGCACCCCGAGGCCCATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCACCGTC 11070746 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 |||||||||||| |||||| ||||||||| ||||| |||||| ||||| ||| || Sbjct 11070745 ACACACGTAGAACTGACACAGGGCGTGGCAGGGGGGCAGAGCCATGTTGGGCATGTCTGC 11070686 Score = 120 bits (132), Expect = 4e-22 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| |||| || ||||||||||||||||||||||| || || |||||||| || ||| Sbjct 11069764 GTACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGTCCCAGGTCGCCTTCCTC 11069705 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 |||| | |||| | | |||||||||||||| |||||||| ||||||||||| Sbjct 11069704 TCTGTCTGTGAACCCGAGGTTGTCCAGGAAGTCCCGGGATCCGTTGGCATCCCAGATCTT 11069645 Query 146160 GACGCCCCTCGCGGAGAGCTCATTGG 146185 || || |||| |||||||| |||| Sbjct 11069644 CACACCTTTCGCCGAGAGCTCTTTGG 11069619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076615601000