Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_002371.2 Length=41724 Score E Sequences producing significant alignments: (Bits) Value seq25 327 3e-85 >seq25 Length=96939502 Score = 327 bits (362), Expect = 3e-85 Identities = 238/273 (87%), Gaps = 11/273 (4%) Strand=Plus/Plus Query 39219 GATGTTTCTGCTGGGCGTAAGCGCCTGCAAGTCTCCGCCACCTGTCCAAAGTCAACGACC 39278 ||||| |||||| |||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct 78019634 GATGTCATTGCTGGCCGTAAGCGGCTGCAAGTCGCCGCCACCTGTGCAAAGTCAACGACC 78019693 Query 39279 GGAGCCAGCGGCATGGGCGATGGAGAAAGCCCAAGACTTACAGCAGATGCTGAACTCAAT 39338 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 78019694 GGAGCCAGCAGCATGGGCGATGGAGAAAGCCCAAGACTTACAGCAGATGCTGAACTCAAT 78019753 Query 39339 TATTACCGTCTCCGAAGTGGAATCGACAGGATAACCGCGCAGGTTAACTACCTGCAGGAG 39398 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 78019754 TATTACCGTCTCCGAAGTGGAATCGACAGGATAACCGCGCAGGTTAACTACCTGCAGGAA 78019813 Query 39399 TACATCAGGAGTCAGTGCTTAAAATAATTTTAATTTCACTGAAATTTAACAAGTGACTTT 39458 |||||||||| || ||| | |||||||||| || || || | | |||| | ||| Sbjct 78019814 TACATCAGGACGCAATGCCTGAAATAATTTT--TT----TGCAAATCACAAAGTCAATTT 78019867 Query 39459 CAGGAAAATGCCTCGCAGATGCGGGGCGTTTTT 39491 | || ||||||| |||||||||| ||||| Sbjct 78019868 AATGA----GCCTCGC-GATGCGGGGCTTTTTT 78019895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133395160398300