Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 2e-14 seq23 86.0 1e-11 >seq4 Length=27622843 Score = 95.1 bits (104), Expect = 2e-14 Identities = 174/255 (68%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 94785 GCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACC 94844 ||| | ||| || || | ||||||||||| || || ||| || || || ||||| || Sbjct 17918861 GCCAATTCCCCCGGCCGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCGTAAATGCC 17918802 Query 94845 CTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGT 94904 || ||||| || |||| | | | || |||||||| ||| || || || || || Sbjct 17918801 TTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGT 17918742 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| || || || || |||||||| ||||| || | | | ||||| || | || Sbjct 17918741 TCCCGCGTTGAAGAGCGTAGGGGAAGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTA 17918682 Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 || |||||| | | |||||||| | | ||| || || |||| || | ||| | ||| Sbjct 17918681 CGTCTCAATGGCTGCGTTGATGTCCGTTTTGTGGATCCCAACAGATACTCTCATGAGCAT 17918622 Query 95025 GTCCTGAGGGCGCTC 95039 || ||| || ||||| Sbjct 17918621 GTGCTGCGGACGCTC 17918607 >seq23 Length=22362490 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967 ||| | |||||| || ||||| ||||| || ||||||||||| || ||||||| | Sbjct 14674650 GGAGCGAATTGTGGCTTTTGCAGCAGTGGAGGGAATCTTCTTCTCCGGCTCATTCGCTGC 14674709 Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027 ||||| ||| ||||||| || || | ||||||| || |||| |||||| ||| | || Sbjct 14674710 CATTTATTGGCTCAAGAAGAGAGGACTAATGCCTGGCCTTACCTACTCCAACGAGCTGAT 14674769 Query 102028 TTCTAGGGACGA 102039 | ||||| || Sbjct 14674770 TAGCAGGGATGA 14674781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583683023875