Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq14 120 4e-22 seq18 109 8e-19 >seq14 Length=28398722 Score = 120 bits (132), Expect = 4e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 8762 TCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGG 8821 ||||| || |||||||| || |||||||| | |||||||||||| ||| ||| ||| Sbjct 16404036 TCTCCCCCAAAGGTGCTCGGCTTCCAGTACTCAGGGGAGCAGATGGGGTTTCCCAGCAGG 16403977 Query 8822 CCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGA 8881 ||||| ||||| || |||||||| | ||| | || |||||||| || ||| | | | | Sbjct 16403976 CCTTTCAGGGAGAAGGGAGCCCCTATCTCAACCATACTCTCACCAAATATGCTGCTAGAA 16403917 Query 8882 CGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTAAAG 8940 || | || |||| || || |||| ||| ||||||| ||| || ||||| || || || Sbjct 16403916 CGTGTTTTCTCCAACAGGATACCGGGGTAAAACTCCAAAGCATCTATGTCACCATAGAG 16403858 Score = 102 bits (112), Expect = 1e-16 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 9613 CCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCT 9672 || |||||||| |||| | || || || || || || || ||| ||||||||| Sbjct 16399568 CCAATAATGATAAGTCTGGCAGTTTGGAAGAGCTGCTCATCGTCCCAGGTGGGATGTTCT 16399509 Query 9673 CGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATG 9732 | |||||| | || || | |||||| || ||||||||||| || || || ||||| || Sbjct 16399508 CCTTTCAGGATGTCACAGAGTCTGTTATGCTCCCTGAGCCATATGGTGGCATACATGGTG 16399449 Query 9733 AGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTT--TCGGGCA 9790 ||||| |||| | |||||| ||| ||||| | | |||||||| | | | || || Sbjct 16399448 AGACCCGGCAGGATGCCAAATATCTCCTGACCAATAACCAGACGCTTCTCTGGAGGGACA 16399389 Query 9791 CTTCGGGAGGATAGATCATGTGCACCTGGACATC 9824 ||| |||||| | ||||||||| |||| || Sbjct 16399388 CTT--TCAGGATACACCATGTGCACAGGGACCTC 16399357 >seq18 Length=27569954 Score = 109 bits (120), Expect = 8e-19 Identities = 170/241 (71%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 9613 CCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCT 9672 ||||| | ||||| || | ||||| || || |||||| ||| || || || | Sbjct 7564970 CCGATCAGAATGAGCCGTGAAGTCTGGAAAAGCCTTTCGTCGTCCCAGTCAGGGTGGACC 7564911 Query 9673 CGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATG 9732 ||||| ||||| ||||| | ||||||||||| |||||||| || ||||||||||| Sbjct 7564910 TCCTTCAGCACATCACACACCCGGTTGTGTTCCCGTAGCCAGATCGTGGCGTACATCATC 7564851 Query 9733 AGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACT 9792 ||||| || |||||||| || ||||| || || ||||| | || | ||| || || Sbjct 7564850 AGACCGGGGACCAGGCCGAACGCCTCGTGGCCCACAGCGAAGCGGTGAGCTTCAGGAACA 7564791 Query 9793 TCGGGAGGATAGATCATGT--GCACCTGGACATCTTTGACCGAGGGGGGATACATTTCAC 9850 | ||||| ||| ||| | ||||| || || || || | ||||| ||||| || | Sbjct 7564790 TGAGGAGGGTAGTGCATTTCAGCACC--CACTTCCTTTACTGTTGGGGGGTACATCTCTC 7564733 Query 9851 C 9851 | Sbjct 7564732 C 7564732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708524578586000