Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq10 113 4e-20 seq5 104 2e-17 >seq10 Length=23202889 Score = 113 bits (124), Expect = 4e-20 Identities = 166/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | || |||| || || ||||||||||| || ||||||||||||| Sbjct 4415852 CCTCCTCTCAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 4415793 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || |||| || ||||| || | || || ||||| ||||| || Sbjct 4415792 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 4415733 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || ||| || || | | | ||||||| ||||||| Sbjct 4415732 ATGCCCTCCTTGTCCTGGATCTTAGCT--TTGACATTTTCAATGGTGTCGCTGGGCTCCA 4415675 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 |||| ||||||||| || || ||||| || || ||||| |||||||| ||| Sbjct 4415674 CCTCCAAGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATCTTG 4415622 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | || |||| || || ||||||||||| || ||||||||||||| Sbjct 4416080 CCTCCTCTGAGACGCAAGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 4416021 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | || |||| || || || || | || || ||||| ||||| || Sbjct 4416020 AGAGTGCGGCCATCTTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 4415961 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| || || || || || |||||| | | | ||||||| ||||||| Sbjct 4415960 ATGCCCTCCTTATCCTGGATCTTGGC--CTTCACGTTCTCGATGGTGTCGCTGGGCTCCA 4415903 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||| || || || || |||||||| || |||||||| Sbjct 4415902 CCTCCAGGGTGATGGTCTTACCAGTGAGGGTTTTGACGAAGATCTGCAT 4415854 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || ||||||||||||| | || | | || Sbjct 4416293 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCT 4416234 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| || | || || ||||| ||||| || | |||||| || || Sbjct 4416233 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTATCC 4416174 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| || || | | | ||||||| ||||||| |||| |||||||| Sbjct 4416173 TGGATCTTAGCT--TTGACATTTTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGG 4416116 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || || |||||||| || |||||||| Sbjct 4416115 TCTTACCAGTGAGGGTTTTGACGAAGATCTGCAT 4416082 >seq5 Length=28395245 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| || | ||| || ||||||||||| || ||||||||||| | | ||| | | || Sbjct 9215377 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 9215436 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | || |||| ||| || || || | ||| || ||||| Sbjct 9215437 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 9215496 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || |||||| | | | ||||||| |||||| |||| ||||||| Sbjct 9215497 CTGGATCTTGGC--CTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAAGGTGATG 9215554 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || ||||| || |||||||| |||||||| Sbjct 9215555 GTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 9215589 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| || | ||| || ||||||||||| || ||||||||||| | | ||| | | || Sbjct 9219837 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 9219896 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | || |||| ||| || || || | ||| || ||||| Sbjct 9219897 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 9219956 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || |||||| | | | ||||||| |||||| |||| ||||||| Sbjct 9219957 CTGGATCTTGGC--CTTCACGTTCTCAATGGTGTCGCTGGGCTCGACCTCCAAGGTGATG 9220014 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || ||||| || |||||||| |||||||| Sbjct 9220015 GTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 9220049 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| || | ||| || || |||||||| || ||||||||||| | | ||| | | || Sbjct 9219609 CAGGACAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 9219668 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | || |||| ||| || || || | ||| || ||||| Sbjct 9219669 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 9219728 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || |||||| | | | ||||||| |||||| || | ||||||| Sbjct 9219729 CTGGATCTTGGC--CTTCACGTTCTCAATGGTGTCGCTGGGCTCGACCTCGAGGGTGATG 9219786 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || || ||||| || || |||||||| ||||||||| Sbjct 9219787 GTCTTACCGGTGAGGGTCTTGACAAAGATCTGCATT 9219822 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| || | ||| || |||||||||||||| ||||||||||| | | ||| | | || Sbjct 9220065 CAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 9220124 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | || |||| ||| || || || | ||| || ||||| Sbjct 9220125 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 9220184 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || |||||| | | | ||||||| |||||| || | ||||||| Sbjct 9220185 CTGGATCTTGGC--CTTCACGTTCTCAATGGTGTCGCTGGGCTCGACCTCGAGGGTGATG 9220242 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || ||||| || || || || |||||||| Sbjct 9220243 GTCTTACCAGTCAGGGTCTTAACGAAGATCTGCAT 9220277 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| || | ||| || |||||||||||||| ||||||||||| | | ||| | | || Sbjct 9220293 CAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 9220352 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | || |||| ||| || || || | ||| || ||||| Sbjct 9220353 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 9220412 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || |||||| | | | ||||||| |||||| || | ||||||| Sbjct 9220413 CTGGATCTTGGC--CTTCACGTTCTCAATGGTGTCGCTGGGCTCGACCTCGAGGGTGATG 9220470 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || ||||| || || || || |||||||| Sbjct 9220471 GTCTTACCAGTCAGGGTCTTAACGAAGATCTGCAT 9220505 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| || | ||| || |||||||||||||| ||||||||||| | | ||| | | || Sbjct 9220521 CAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 9220580 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | || |||| ||| || || || | ||| || ||||| Sbjct 9220581 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 9220640 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || |||||| | | | || |||| |||||| || | ||||||| Sbjct 9220641 CTGGATCTTGGC--CTTCACGTTCTCAATGGTATCGCTGGGCTCGACCTCGAGGGTGATG 9220698 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || || || || || || |||||||| |||||||| || Sbjct 9220699 GTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGTT 9220736 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| || | ||| || ||||||||||| || ||||||||||| | | ||| | | || Sbjct 9215605 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 9215664 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 || | || ||||| ||| | || |||| ||| || || || | ||| || ||||| Sbjct 9215665 TTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 9215724 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || |||||| | | | ||||||| |||||| || | ||||||| Sbjct 9215725 CTGGATCTTGGC--CTTCACGTTCTCAATGGTGTCGCTGGGCTCGACCTCGAGGGTGATG 9215782 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || ||||| || || || || |||||||| Sbjct 9215783 GTCTTACCAGTCAGGGTCTTAACGAAGATCTGCAT 9215817 Score = 82.4 bits (90), Expect = 6e-11 Identities = 150/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| || | ||| || ||||||||||| || ||||||||||| | | ||| | | || Sbjct 9215833 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 9215892 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | || |||| ||| || || || | ||| || ||||| Sbjct 9215893 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 9215952 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || |||||| | | | || || | ||||| || | ||||||| Sbjct 9215953 CTGGATCTTGGC--CTTCACGTTCTCAATGGTATCACTTGGCTCGACCTCGAGGGTGATG 9216010 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || || || || || || |||||||| |||||||| || Sbjct 9216011 GTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGTT 9216048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087876574750