Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq10 131 1e-25 seq4 95.1 1e-14 >seq10 Length=23202889 Score = 131 bits (144), Expect = 1e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 22212 TGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGA 22271 ||| |||||||| || ||||| || || | || ||||| || |||| | || ||||| Sbjct 4415619 TGTCAAGATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACCTTGGAGGTGGA 4415678 Query 22272 AACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331 ||| ||| ||| | || || ||||| || || || ||||||||||| || || || Sbjct 4415679 GCCCAGCGACACCATTGAAAATGTCAAAGCTAAGATCCAGGACAAGGAGGGCATCCCCCC 4415738 Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391 || || || ||||| || || |||||||| ||| | || ||| ||||||| ||||||| Sbjct 4415739 AGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGA 4415798 Query 22392 TTACAACATTCAAAAAGAATCCACC 22416 |||||||| || || || |||||| Sbjct 4415799 CTACAACATCCAGAAGGAGTCCACC 4415823 >seq4 Length=27622843 Score = 95.1 bits (104), Expect = 1e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 129737 TGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGAT 129796 ||||||| || ||||| | ||| | || || |||| |||||||||| || || || | Sbjct 17919420 TGTACTCAACTATTTCTGTGCAGAGGTTGCTGCTTTTGATGGTGCCCAGATTCTGCTGGT 17919361 Query 129797 TACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTC 129848 | || ||| ||||||| || |||||||||| |||||||||||| || ||||| Sbjct 17919360 TGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTC 17919309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727872114125