Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 3e-15 >seq5 Length=28395245 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| || | || || |||||| || || || ||| Sbjct 9219853 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 9219912 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || || || ||||||||||| ||||| ||||| || Sbjct 9219913 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 9219972 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||||| ||| ||||| |||| ||| | || ||||| ||||| || Sbjct 9219973 ACGTTCTCAATGGTGTCGCTGGGCTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTC 9220032 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||| ||||||||| Sbjct 9220033 TTGACAAAGATCTGCATG 9220050 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| || | || || |||||| || || || ||| Sbjct 9215393 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 9215452 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || || || ||||||||||| ||||| ||||| || Sbjct 9215453 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 9215512 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||||| ||| || || |||| ||| | || ||||| ||||| || Sbjct 9215513 ACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTC 9215572 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||| ||||||||| Sbjct 9215573 TTGACAAAGATCTGCATG 9215590 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || | || || | ||| | || || || ||||| |||||||| || Sbjct 9220504 ATACCACCCCTGAGACGCAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCA 9220563 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||| || || || ||||| |||| || | ||| || || || Sbjct 9220564 GAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGG 9220623 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||| || | | |||| ||| ||| ||| ||| Sbjct 9220624 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTATCGCTGGGCTCG 9220683 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | || ||||| || || || || ||||| ||||||||| Sbjct 9220684 ACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 9220734 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| || | || || ||||||||| || || ||| Sbjct 9215621 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCA 9215680 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || || || ||||||||||| ||||| ||||| || Sbjct 9215681 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 9215740 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||||| ||| ||||| || | ||| | || || || ||||| || Sbjct 9215741 ACGTTCTCAATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTACCAGTCAGGGTC 9215800 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 9215801 TTAACGAAGATCTGCAT 9215817 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| || | || || |||||| || || || ||| Sbjct 9219625 GTTGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 9219684 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || || || ||||||||||| ||||| ||||| || Sbjct 9219685 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 9219744 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||||| ||| ||||| || | ||| | || || ||||| || || Sbjct 9219745 ACGTTCTCAATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTACCGGTGAGGGTC 9219804 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 9219805 TTGACAAAGATCTGCAT 9219821 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || ||||| |||||||| || | || || |||||| || || || ||| Sbjct 9220081 GTGGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 9220140 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || || || ||||||||||| ||||| ||||| || Sbjct 9220141 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 9220200 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||||| ||| ||||| || | ||| | || || || ||||| || Sbjct 9220201 ACGTTCTCAATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTACCAGTCAGGGTC 9220260 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 9220261 TTAACGAAGATCTGCAT 9220277 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || | || || | ||| | || || || ||||| |||||||| || Sbjct 9220276 ATACCACCCCTGAGACGCAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCA 9220335 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||| || || || ||||| |||| || | ||| || || || Sbjct 9220336 GAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGG 9220395 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||| || | | |||| ||||||| ||| ||| Sbjct 9220396 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCG 9220455 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || || ||||| || || || || |||||||| Sbjct 9220456 ACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTAACGAAGATCTGCAT 9220505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134271990300