Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq10 134 3e-26 >seq10 Length=23202889 Score = 134 bits (148), Expect = 3e-26 Identities = 147/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| || ||||| | || || || |||||| Sbjct 4416044 TCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCCAGCTGCTTACCGGCGAAG 4415985 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||||| || || || ||||||||||| || || |||||| Sbjct 4415984 ATCAGACGCTGCTGG---TCTGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACG 4415928 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || || || || ||| Sbjct 4415927 TTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTGAGGGTTTTG 4415868 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 4415867 ACGAAGATCTGCAT 4415854 Score = 134 bits (148), Expect = 3e-26 Identities = 147/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| || ||||| | || || || |||||| Sbjct 4416272 TCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAG 4416213 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||||| || || || ||||||||||| || ||||| || Sbjct 4416212 ATCAGACGCTGCTGG---TCTGGGGGGATGCCCTCCTTATCCTGGATCTTAGCTTTGACA 4416156 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| || | ||||| | || || || || ||||| ||||| || || || || ||| Sbjct 4416155 TTTTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTGAGGGTTTTG 4416096 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 4416095 ACGAAGATCTGCAT 4416082 Score = 125 bits (138), Expect = 2e-23 Identities = 145/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| || ||||| | || || || |||||| Sbjct 4415816 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAG 4415757 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || ||| ||||| || || || |||||||| || ||||| || Sbjct 4415756 ATCAGACGCTGCTG---GTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCTTTGACA 4415700 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| || | ||||| | || || || | ||||| ||||| || ||||| ||||| Sbjct 4415699 TTTTCAATGGTGTCGCTGGGCTCCACCTCCAAGGTGATGGTCTTACCAGTCAGGGTCTTC 4415640 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 4415639 ACAAAGATCTGCAT 4415626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654022141950