Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4 168 8e-37 seq5 95.1 1e-14 seq8 93.3 5e-14 >seq4 Length=27622843 Score = 168 bits (186), Expect = 8e-37 Identities = 831/1306 (64%), Gaps = 44/1306 (3%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | || | | |||| ||||| |||| ||| |||||||||||| Sbjct 17919988 TAGATGTTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 17919929 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || |||||||| || |||| || |||||||| | | || | | || ||| Sbjct 17919928 GCCGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCC 17919869 Query 114062 TTGAGGGCGTCCCAGTC------GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAAC 114115 || ||| | | |||||| || | || || | |||||| |||| || || Sbjct 17919868 TTCAGGACCTTCCAGTCCAGCAGGTCGGTGGGCGTCTTCTCCC------ACATGTCGTAC 17919815 Query 114116 TGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCC---CTCAACC 114172 |||||||| || | | | | || || || || | |||||||| ||||| |||| | Sbjct 17919814 TGGAGGATGCCCTTGCTGACCGGGGAGCCTTCGTACGTCTCGTAGGGGCCGAGCTCAGCA 17919755 Query 114173 TCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 114232 |||| ||| |||||||||| ||||| |||| || || |||||||| || || Sbjct 17919754 ---GCCAGCTCGCAGCTCGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATTTGAATG 17919698 Query 114233 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCG 114292 |||| || ||||| | || |||| | || | || || | || || Sbjct 17919697 TTCAGCAGCTGAGCCTCAGGGCTTTCGAACGGGTAGCGCATGAGGATGAAGGCGTCTGCC 17919638 Query 114293 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT-TCGAGCGGTCTC 114351 | ||| ||||| |||| || || || | || | | | || ||||| || || | || Sbjct 17919637 AAACCCTGGACGCCGATTCCGATCGGCCTGTGGCGCTTGTTGGACTTCTC---CGCT-TC 17919582 Query 114352 ---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGT 114408 ||| || || | || | ||||||| | | || | |||||| || || || || Sbjct 17919581 AGGCACTGGGTAGTAGTTAATTTCGATAATCTTGTTCAAGTTTTTGACGATTACTTTGGT 17919522 Query 114409 GATTTCATGA-AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAA 114467 | ||| || |||| | |||||| | || ||| |||| ||| | | Sbjct 17919521 CACAA-ATGCTAGTTTTTTAAAGTCAAAAGTCCG---CTCAGGGGTGACGTACATGTTGA 17919466 Query 114468 GGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 114527 | ||||| || |||||||||||||| | |||||| | |||||||| | |||| Sbjct 17919465 GCGCGATGGAGGCCAGATTACACACCGCTACCTCATCGTCGCTGGTGTACTCAACTATTT 17919406 Query 114528 CCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 114587 | || || | || || || |||||||||| |||| || || ||| |||| | Sbjct 17919405 CTGTGCAGAGGTTGCTGCTTTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGC 17919346 Query 114588 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 114647 | || || ||||| |||||||| ||||| || || || || ||||||| || ||| || | Sbjct 17919345 AGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTCTGTCTGGGACTCGATAATGGCGT 17919286 Query 114648 TCCAGACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTG 114706 ||| || | | | | || ||| | ||| | | ||| |||| ||| || | ||| Sbjct 17919285 GCCACACCTGCTGAGCCT-TCACCACGCGCTTGACCCTCCCTTCCTTCTCATATGTGGTG 17919227 Query 114707 TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAG 114766 || || || ||||| || ||| | ||| ||||| || || | || || Sbjct 17919226 TAAAGCTTCTCGAACTCCTCCCCCCAGCACTCGTCCAGCCCAGGGCACTCGTTCGGACAC 17919167 Query 114767 AAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGA 114826 | |||||||| | ||| || | ||||||||| |||||||||||||| | Sbjct 17919166 ATCAGAGACCAGTCTGTGTTGCTCTCCACTCTCTTCATGAACAGGTCTGGGATCCACATG 17919107 Query 114827 GCTGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 114885 || |||| || || | | | ||| || | | || || || || |||||| Sbjct 17919106 GCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCGGTG-TTCTTCTTCAGCTCCAA 17919048 Query 114886 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACC----CCTTAC 114941 ||||| | | ||| |||||| || |||||||||| || | | | ||| Sbjct 17919047 GAAGTCAAACACATCGAAGTGCCAGGGCTCCAGGTACATGGCAAACGCTCCGGGCCTCTT 17918988 Query 114942 GACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGA 115001 | | || |||||| || || | ||| ||| || | || | ||||| || | || Sbjct 17918987 GTTG-CCTCCCTGGTCGACGTAGCGCGCAGTGTTGTTGTAGACTCTCAGCATGGGGACGA 17918929 Query 115002 TACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGA--CATCATG 115059 || | || | ||| || || || ||| | | | ||||| || | Sbjct 17918928 GCCCGTTGGAGTTGCCGTTGGTGCCGGCGATATAGCTCCCCGTCGATCTGATGCAGC--T 17918871 Query 115060 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 115119 || || ||||| ||||| ||| |||| ||||| | || |||| | | || || | Sbjct 17918870 GACCGCCACGCCAATTCCCCCGGCCGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTC 17918811 Query 115120 GTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGG 115179 ||| || || ||||| ||| | || | |||| ||||||||||| |||| ||||| Sbjct 17918810 GTAAATGCCTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGG 17918751 Query 115180 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 115225 ||| || || ||||||||||| || || | |||||| ||||| Sbjct 17918750 CCTGTTGGTTCCCGCGTTGAAGAGCGTAGGGGAAGCGTGGGTGAAC 17918705 >seq5 Length=28395245 Score = 95.1 bits (104), Expect = 1e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| ||||||| | |||| ||||| |||| ||| ||||| ||||| Sbjct 12622170 TAGATGTTGCTGGTGTAGGGCTCAATGGACTCGTTGTTGCCCAGGATCTGGGCAGTGGAA 12622229 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033 |||||||||||||| |||| ||| || ||||| Sbjct 12622230 GCTGTGGGCATGGGGGCCAAGAGCAGACTGTT 12622261 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/126 (76%), Gaps = 4/126 (3%) Strand=Plus/Plus Query 114512 GTGTACTCTATAATTTCCGTACACAAATT--TGAACTCTTAATGGTGCCCAAGTTCTTTT 114569 |||||||||| ||| ||||| |||| ||| || | | | |||||||||| |||| | Sbjct 12623623 GTGTACTCTACAATCTCCGTGCACAGATTGCTGGATT--TGATGGTGCCCAGATTCTGCT 12623680 Query 114570 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 114629 | || ||| |||| || || |||||||| |||||||||||||| || ||||| || | Sbjct 12623681 GGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGCGTACCGGTCTCTGTCT 12623740 Query 114630 GGGACT 114635 | |||| Sbjct 12623741 GAGACT 12623746 >seq8 Length=22893611 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 ||||||| | | ||| || || || |||||| |||||| ||||| || || | ||| | Sbjct 22892198 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGTCCGGGCATCAGGCCTCTCTTTT 22892139 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 ||| |||||| |||||| || ||||| |||||||||||||||||||| Sbjct 22892138 TCAGCCAGAAGATCGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCAC 22892090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353413327000