Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_011976.1 Length=43016 Score E Sequences producing significant alignments: (Bits) Value seq25 325 1e-84 >seq25 Length=96939502 Score = 325 bits (360), Expect = 1e-84 Identities = 192/200 (96%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 40690 GATGTTTCTGCTGGTCGTAAGCGCCTGCAAGTCGCCGCCACCTGTGCAAAGTCAACGACC 40749 ||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 78019634 GATGTCATTGCTGGCCGTAAGCGGCTGCAAGTCGCCGCCACCTGTGCAAAGTCAACGACC 78019693 Query 40750 GGAGCCAGCGGCATGGGCAATGGAGAAAGCCCAAGACTTACAGCAGATGCTGAACTCAAT 40809 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 78019694 GGAGCCAGCAGCATGGGCGATGGAGAAAGCCCAAGACTTACAGCAGATGCTGAACTCAAT 78019753 Query 40810 TATTACCGTCTACGAAGTGGAATCGACAGGATAACCGCGCAGGTTAACTACCTGCAGGAA 40869 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 78019754 TATTACCGTCTCCGAAGTGGAATCGACAGGATAACCGCGCAGGTTAACTACCTGCAGGAA 78019813 Query 40870 TACATCAGGACGCAATGCCT 40889 |||||||||||||||||||| Sbjct 78019814 TACATCAGGACGCAATGCCT 78019833 Score = 156 bits (172), Expect = 1e-33 Identities = 153/183 (84%), Gaps = 12/183 (7%) Strand=Plus/Plus Query 41070 AGCCTCGCATTTGCGGGGCTTTTTTACATCTGCAGTAAACCGCGCATCGCA-GCGCGTAA 41128 |||||||| | |||||||||||||| || |||||||| |||||||| || |||| || Sbjct 78019872 AGCCTCGCGAT-GCGGGGCTTTTTTATGTCCGCAGTAAA-CGCGCATCTCACGCGCATAT 78019929 Query 41129 CAATCCCGAGTCTTTCAGAAAGCTGAGCCTGAGAACTGCCG-TATATGGTGGCGACCATC 41187 || | ||| ||||||| |||| ||||||||||| ||||| |||| |||||||||| || Sbjct 78019930 TAA-CGAGAGCCTTTCAGTAAGC-GAGCCTGAGAAATGCCGTTATA-GGTGGCGACC-TC 78019985 Query 41188 TCGGGGACGGCTTTTCTGTGCGAACAGGCTCATCTTTCTAAAAGGTAA--ACGCTATGAA 41245 || || ||||||||||||| | ||||||||| ||||||||||||||| |||||||||| Sbjct 78019986 TCTCGGGCGGCTTTTCTGTGAG-ACAGGCTCA-CTTTCTAAAAGGTAAAGACGCTATGAA 78020043 Query 41246 TAA 41248 ||| Sbjct 78020044 TAA 78020046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137529559170900