Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq18 104 3e-17 seq14 96.9 5e-15 >seq18 Length=27569954 Score = 104 bits (114), Expect = 3e-17 Identities = 127/170 (75%), Gaps = 4/170 (2%) Strand=Plus/Minus Query 9552 ATCAGGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTG 9611 |||||||| ||| | |||||| |||| ||||| |||||||| | || || |||||||| Sbjct 7565496 ATCAGGCATCAGTGGGTGCCAGTGGTACAGGGTGTTGAACTCCGATGCAATGCGGTTCTG 7565437 Query 9612 GTACTGAAAG-GC-GGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTAC 9669 |||||| ||| || ||| |||||| | ||| |||||||| | |||| ||||| ||| Sbjct 7565436 GTACTGGAAGCGCTGGT--TGAACAGCAGCTCGGGGTCAAACTTGAGCTTGAAGTTGTAG 7565379 Query 9670 CCGCTGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCC 9719 || || || ||||| || || | ||| | ||| || ||||| || || Sbjct 7565378 CCACTCAGGTGCTGCACGTAGTCCTCGATCACAATCTTGATGGTCTCTCC 7565329 >seq14 Length=28398722 Score = 96.9 bits (106), Expect = 5e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 8939 GTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGG 8998 ||||| ||||| | || || || || || |||||||| || ||||||||| | ||| Sbjct 16404060 GTTTTGACGATATTGAAGCCAGTCTCTCCCCCAAAGGTGCTCGGCTTCCAGTACTCAGGG 16404001 Query 8999 GAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATG 9058 ||||||||| ||| ||| || ||||||| ||| || |||||||| | ||| | || Sbjct 16404000 GAGCAGATGGGGTTTCCCAGCAGGCCTTTCAGGGAGAAGGGAGCCCCTATCTCAACCATA 16403941 Query 9059 CTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCG 9118 |||||||| || ||| | | ||| | ||| || | | || || | ||| | || Sbjct 16403940 CTCTCACCAAATATGCTGCTAGAACGTGTTTTCTCCAACAGGATACCGGGGTAAAACTCC 16403881 Query 9119 ACAGCCTCGACGTCGCCATAGAG 9141 | ||| || | ||| |||||||| Sbjct 16403880 AAAGCATCTATGTCACCATAGAG 16403858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723727773835000