Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq15 179 3e-39 seq4 107 1e-17 seq7 86.0 5e-11 >seq15 Length=26439989 Score = 179 bits (198), Expect = 3e-39 Identities = 930/1470 (63%), Gaps = 14/1470 (1%) Strand=Plus/Plus Query 517249 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 517308 ||| || |||| | |||||| ||||| || |||||||| | || || || || || | Sbjct 13913285 TTTGTCGACGGCTGACACATTCAGAATGCCGTTGGCATCGATGTCGAAAGTTACCTCCAC 13913344 Query 517309 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 517368 || || || |||| |||| || ||||| ||| | | ||| | ||||| || Sbjct 13913345 CTGTGGTACACCTCGGGGAGCGGGAGGGATACCTGTGAGCTCAAACTTGCCCAGGAGGTT 13913404 Query 517369 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 517428 || || || || | || ||||||||| | | || || || | | || || Sbjct 13913405 GTTGTCCTTGGTCATGGCTCTCTCACCCTCGTACACCTGAATCAGCACACCTGGCTGGTT 13913464 Query 517429 ATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAA 517487 ||| || || || | || | ||||| | | || || || || ||||| | | | Sbjct 13913465 ATCCGAGTATGTGGAGAAGA-TCTGGGTCTGCTTGGTGGGGATGGTGGTGTTGCGTTTGA 13913523 Query 517488 TAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 517547 | | ||||||| |||||||| || || | || ||||| || |||| || |||| Sbjct 13913524 TTAGGGGCGTCATAACTCCACCTGCAGTCTCAATGCCCAGAGACAGGGGAGCCACGTCAA 13913583 Query 517548 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 517607 || | | || ||| | || || ||| | ||| | || ||||| || || | || Sbjct 13913584 GCAGCAGCAGATCTTGGACGTTCTCTGAAGTGTCACCCATGAGGATAGCAGCCTGGACAG 13913643 Query 517608 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 517667 ||||||| || || || |||||||| || || | | | || || | | ||||| | Sbjct 13913644 CAGCACCGTAGGCCACGGCTTCATCTGGGTTGATGCTCTTGTTCAGGTCCCTGCCATTAA 13913703 Query 517668 AAAAATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACA 517726 |||| | || |||| || | | || ||||| | | || || ||||| | || Sbjct 13913704 AAAAGTCCTGCAAGAGCTTCTGG-ATTTTGGGAATTCTTGTGGAACCACCAACCAGGACT 13913762 Query 517727 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 517786 |||||||| || ||| |||||||| || | ||| | | || || || ||||| Sbjct 13913763 ATTTCATGGACTCTTGACTTATCCAGCTTGGCATCTTGCAGGGCCTTCTCTACTGGTTCC 13913822 Query 517787 AGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACA 517846 || | || || | || || || || || || || || || || || Sbjct 13913823 AGTGTTCCCCTGAAAAGCTCAGAGTTGAGCTCCTCAAAGCGTGCCCTTGT--GATGGAGG 13913880 Query 517847 T-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAG 517904 | || || || || || || |||| ||| |||| ||||| ||| || || || | Sbjct 13913881 TGTAGAAGTCGATGCCCTCAAACAGAGAGTCAATCTCAATGCTAGCCTGGGTGCTGGAGG 13913940 Query 517905 ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT 517964 | || | | || || | ||||| ||||| | || || | | ||| | || ||| Sbjct 13913941 ACAGGGTCCTCTTCGCTCTCTCACAAGCTGTGCGCAGCCTCCTCACTGCTCT--CTTATT 13913998 Query 517965 --GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACG 518022 | | | || | || | |||||| ||||| || |||||| | | || | || Sbjct 13913999 TTGGCTGATGTCCTTCTTGTGTTTTCTTTTGAATTCCTCAACAAAGTGGTTGACCATCCG 13914058 Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082 || |||||||| || || || | | || | ||| | || ||| | || | || | Sbjct 13914059 GTTGTCAAAATCCTCCCCGCCAAGGTGTGTGTCTCCCGCGGTGGCTTTCACCTCAAAGAT 13914118 Query 518083 TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142 ||||| |||| | || | | || ||| ||| || ||||| | |||||| || || Sbjct 13914119 GCCATCCTCAATGGTCAGGATGGACACGTCAAAGGTGCCTCCACCGAGATCAAAGATGAG 13914178 Query 518143 TACATT-CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201 || || | | | | | || ||| || || || || |||| || || || || | Sbjct 13914179 CACGTTGCGCTCCCCTCTTTTACCTTTG-TCCAGGCCGTAAGCAATGGCTGCTGCTGTGG 13914237 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 | ||||| || || || | |||||| || |||| || || ||||| || ||||||| Sbjct 13914238 GCTCATTGATGATCCTTAGAACATTCAGTCCAGAGATCACCCCGGCATCCTTGGTGGCTT 13914297 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTAC 518321 | || || || ||||| ||||| || ||||| || || || |||| | |||| || | Sbjct 13914298 GCCTCTGGGAGTCGTTGAAATAAGCTGGAACTGTGATGACCGCATTTGACACTTTTTGTC 13914357 Query 518322 CAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 518381 | | || || || | | ||||||||| | | ||| || || |||| |||| Sbjct 13914358 CCAGGTAGGCCTCAGCGATCTCCTTCATTTTAACCAGGACCATGGAGGAGATTTCCTCTG 13914417 Query 518382 GGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACAT 518441 || | | ||| | || || ||| || | | | || || | | || Sbjct 13914418 GGTAGAAGGCCTTAGTCTCTCCTTTATACTCAACCTGGACTTTGGGCTTTCCATTATCAC 13914477 Query 518442 TAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTC 518501 | || || || ||||||||| |||||| || || || || | ||| ||||| | || Sbjct 13914478 TGATCACCTTGAATGGCCAGAGTTTCATGTCAGACTGGACGATGGAGTCGTTAAACTTTC 13914537 Query 518502 TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATT 518561 | || || | ||||| || ||||| | || ||||| || || || ||| | || | | Sbjct 13914538 TCCCGATGAGACGTTTAGCGTCAAAGACTGTGTTGGTCGGGTTCATGGCAACCTGGTTCT 13914597 Query 518562 TGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGC 518621 | || ||||||||||| || ||||| || || || | ||||| ||||| || | Sbjct 13914598 TTGCAGCATCTCCAATGAGCCTCTCTGTGTCAGTGAAGGCCACATAGCTGGGAGTGGTTC 13914657 Query 518622 GATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAAC 518681 || || || || || || || || || ||||| |||| || | ||||| |||||| Sbjct 13914658 TGTTGCCCTGGTCGTTGGCGATGATCTCCACTTTGCCATGCTGGAAAACACCGACACAAG 13914717 Query 518682 TAAAAGTTGTTCCTAAATCAATACCAATAG 518711 | | || || || | |||||| ||||||| Sbjct 13914718 AATAGGTGGTGCCCAGATCAATGCCAATAG 13914747 >seq4 Length=27622843 Score = 107 bits (118), Expect = 1e-17 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || |||||||| |||| |||||||||||| |||||||| || || | | ||| Sbjct 19764160 TTTTTGTCCAGACCATAGGCAATAGCAGCAGCAGTCGGTTCATTGATGATACGAAGGACA 19764101 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || || |||| ||| | ||||||||||| ||||| || | || || || || || || Sbjct 19764100 TTCAGCCCAGAAATGGTCCCTGCATCTTTGGTGGCCTGGCGCTGAGAGTCATTGAAGTAG 19764041 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTAC 518313 ||||| ||||| | || |||| ||||| Sbjct 19764040 GCAGGCACAGTCACTACAGCATTTGTTAC 19764012 >seq7 Length=25821574 Score = 86.0 bits (94), Expect = 5e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 |||| ||||| ||||||||||||||||| | ||||| || || ||||| ||||| || Sbjct 12619025 GCAGATACATTCAGAATACCATTGGCATCAATGTCAAAGGTCACCTCAATCTGAGGAACA 12619084 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 ||||| |||||||||| || || || | ||| | |||||| | ||||| || || Sbjct 12619085 CCTCTGGGAGCAGGTGGAATACCGGTCAGCTCAAACTTGCCCAGAATGTTATTGTCCTTG 12619144 Query 517379 GTGAATTTTCGTTCACCCTC 517398 || | || |||||||| Sbjct 12619145 GTCATGGCTCTCTCACCCTC 12619164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780821159417650