Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4 158 2e-33 seq23 89.7 6e-13 seq8 84.2 3e-11 >seq4 Length=27622843 Score = 158 bits (174), Expect = 2e-33 Identities = 886/1399 (63%), Gaps = 42/1399 (3%) Strand=Plus/Plus Query 111704 GTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAG 111763 ||||| |||||| | || || ||||||||||| || || || || || ||||||| Sbjct 17918705 GTTCACCCACGCTTCCCCTACGCTCTTCAACGCGGGAACCAACAGGCCACAGCTGTCCAG 17918764 Query 111764 TTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGA 111823 || ||||| | || | || || || ||| | |||||||||| ||| || | | Sbjct 17918765 CTGCTTCCTGCTCGCCATGAAAGACGACAGCATCGAAGGCATTTACGACACGCTGAAGCA 17918824 Query 111824 ATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATG--TCAGA 111881 ||||||| ||||| |||| ||| || || || || || || | || ||||| Sbjct 17918825 GTGTGCCCTCATCTCCAAGTCGGCCGGGGGAATTGGCGTGGCGGTCA--GCTGCATCAGA 17918882 Query 111882 GCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTT 111941 | | | ||| || || || || | || | || | | || ||||| Sbjct 17918883 TCGACGGGGAGCTATATCGCCGGCACCAACGGCAACTCCAACGGGCTCGTCCCCATGCTG 17918942 Query 111942 CGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCG-CAAG------GG 111994 | || | ||| ||| |||||||| || |||| ||| | | |||| || Sbjct 17918943 AGAGTCTACAACAACACTGCGCGCTACGTCGACCA----GGGAGGCAACAAGAGGCCCGG 17918998 Query 111995 ATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCG 112054 | | | || | || || ||||| |||||| ||| | | || ||| | ||| || Sbjct 17918999 AGCGTTTGCCATGTACCTGGAGCCCTGGCACTTCGATGTGTTTGACTTCTTGGAGCTGAA 17919058 Query 112055 TCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCC 112114 ||| || | |||||| | || | | || || |||| ||| | ||||| || Sbjct 17919059 GAAGAACACCGGAAAGGAGGAGCAGAGGGCCAGAGACCTTTTCTACGCCATGTGGATCCC 17919118 Query 112115 AGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA---ATTGGTCTCTCTTTTGTCCAGA 112171 ||| || |||||||||||||| |||||| || | |||||||| | ||||| | Sbjct 17919119 AGACCTGTTCATGAAGAGAGT---GGAGAGCAACACAGACTGGTCTCTGATGTGTCCGAA 17919175 Query 112172 CAAGGCACCCGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGT 112230 | || || || || ||| ||| | ||| |||||||| || || ||||| | | Sbjct 17919176 CGAGTGCCCTGGGCTGGACGAGTGCTGGGGG-GAGGAGTTCGAGAAGCTTTACACCACAT 17919234 Query 112231 ACGAGGAAGAAAGTCGGG-CGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATT 112289 | ||| | ||| | ||| | | ||| |||| ||| | |||||| | || ||| Sbjct 17919235 ATGAGAAGGAAGGGAGGGTCAAGCGCGT-GGTGAAGGCTCAGCAGGTGTGGCACGCCATT 17919293 Query 112290 CTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAA 112349 || |||| || || || || ||||| || || ||||| |||||||||||||| ||| Sbjct 17919294 ATCGAGTCCCAGACAGAAACCGGTACGCCGTACATGCTGTACAAAGACGCCTGCAACAGG 17919353 Query 112350 AAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTG 112409 ||||| || || ||||| |||| ||||| || ||||||||| |||||||| | Sbjct 17919354 AAGAGCAACCAGCAGAATCTGGGCACCATCAAAAGCAGCAACCTCTGCACAGAAATAGTT 17919413 Query 112410 GAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAG 112469 || | || | | |||||| || |||||||| || || || ||||| ||| || | Sbjct 17919414 GAGTACACCAGCGACGATGAGGTAGCGGTGTGTAATCTGGCCTCCATCGCGCTCAACATG 17919473 Query 112470 TATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACT 112529 || || || ||| ||| ||||| | | ||||||| || || ||| Sbjct 17919474 TACGTCACCCCTGAG---CGGACTTTTGACTTTAAAAAACTAGCATTTGTGACCAAAGTA 17919530 Query 112530 GTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCT 112586 || |||||| | |||| |||| || | || | ||||| || ||| || Sbjct 17919531 ATCGTCAAAAACTTGAACAAGATTATCGAAATTAACTACTACCCAGTGCCTGA---AGCG 17919587 Query 112587 CGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTA 112646 || || || | | | ||| | || || || |||| ||||| ||| | || || | Sbjct 17919588 GAGAAGTCCAACAAGCGCCACAGGCCGATCGGAATCGGCGTCCAGGGTTTGGCAGACGCC 17919647 Query 112647 TTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATA 112706 ||||| || ||| || | || || | || || || | || | || Sbjct 17919648 TTCATCCTCATGCGCTACCCGTTCGAAAGCCCTGAGGCTCAGCTGCTGAACATTCAAATC 17919707 Query 112707 TTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGT 112766 |||||||| || || ||||||| || |||||||| | ||| |||| | | || Sbjct 17919708 TTTGAGACCATCTACTACGCCGCCCTGGAGGCGAGCTGCGAGCTGGCTGCTGAGCTCGGC 17919767 Query 112767 CCATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATATGT 112824 || || || || | || || || || | ||| |||||| | || || | || |||| Sbjct 17919768 CCCTACGAGACGTACGAAGGCTCCCCGG--TCAGCAAGGGCATCCTCCAGTACGACATGT 17919825 Query 112825 GGGAAGGTGAGACCAAGCTTCACTAC--GACTGGGACGCTCTCAAGGAACGCATCAAGGA 112882 ||| || || || | | | || | |||||| | | || ||||| ||| | Sbjct 17919826 GGG-AGAAGACGCCCACCGAC-CTGCTGGACTGGAAGGTCCTGAAGGAGAAGATCGCCAA 17919883 Query 112883 GAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAAT 112942 | | || | | ||||| || || |||| || ||||| || ||||||||||| || || Sbjct 17919884 GCACGGCGTGAGGAACAGCCTGCTGCTGGCCCCGATGCCCACGGCCTCCACCGCCCAGAT 17919943 Query 112943 CTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCT 113002 | |||| || || || | | | ||| ||||||| | |||||||| | || || Sbjct 17919944 CCTGGGCAACAACGAGTCCATCGAAGCCTACACCAGCAACATCTACACCCGCAGGGTGCT 17920003 Query 113003 CGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCT 113062 | | ||||||||| ||| || || || || | | ||||| | |||| || || Sbjct 17920004 CTCTGGAGAGTTTCAGATCGTGAATCCTCACCTGCTCAAAGACCTGACGGAGAGAGGACT 17920063 Query 113063 CTGGTCCAAGGATATGAAG 113081 ||| | |||| |||||| Sbjct 17920064 GTGGAGCGAGGAGATGAAG 17920082 >seq23 Length=22362490 Score = 89.7 bits (98), Expect = 6e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 102239 |||||| | | || ||||| || ||||| ||||||||||| || || ||| || Sbjct 14674651 GAGCGAATTGTGGCTTTTGCAGCAGTGGAGGGAATCTTCTTCTCCGGCTCATTCGCTGCC 14674710 Query 102240 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 |||||||||||||||||| |||| || ||||| || || || |||||||||||| || Sbjct 14674711 ATTTATTGGCTCAAGAAGAGAGGACTAATGCCTGGCCTTACCTACTCCAACGAGCTGAT 14674769 >seq8 Length=22893611 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||| ||||||||||||||||||||| || || | ||||| || ||| |||| Sbjct 22892090 GTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCTGCGATCTTCTGGCTGAAAAAGAGAGGC 22892149 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 102312 || ||||| || || ||||||||||||||| ||| | ||||||| Sbjct 22892150 CTGATGCCCGGACTGACCTTCTCCAACGAGCTGATCAGCAGAGACGAGG 22892198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742206018000