Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5 102 1e-16 seq23 87.8 2e-12 >seq5 Length=28395245 Score = 102 bits (112), Expect = 1e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 106493 TCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCC 106552 ||||| || ||||||||||| ||| || || |||| ||| || || || ||| Sbjct 12623611 TCATCTTTGCTTGTGTACTCTACAATCTCCGTGCACAGATTGCTGGATTTGATGGTGCCC 12623670 Query 106553 AAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCC 106612 | ||||| ||||| ||||| ||||||| || ||||||||||||||||| ||||| || Sbjct 12623671 AGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGCGTACCG 12623730 Query 106613 GTCTCCGTCTGTGACT 106628 ||||| ||||| |||| Sbjct 12623731 GTCTCTGTCTGAGACT 12623746 >seq23 Length=22362490 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352 ||||||| | | ||| || || || ||| || ||||| ||||| || || | ||||| Sbjct 14674783 CCTCATCCCTGCTAATCAGCTCGTTGGAGTAGGTAAGGCCAGGCATTAGTCCTCTCTTCT 14674724 Query 117353 TCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACG 117412 | | ||||||||| || |||||| |||||||||||||| |||||||| ||||| | Sbjct 14674723 TGAGCCAATAAATGGCAGCGAATGAGCCGGAGAAGAAGATTCCCTCCACTGCTGCAAAAG 14674664 Query 117413 CAAAAAGGCGCTC 117425 | | || ||||| Sbjct 14674663 CCACAATTCGCTC 14674651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980615631000