Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_016158.1 Length=49576 Score E Sequences producing significant alignments: (Bits) Value seq25 1157 0.0 >seq25 Length=96939502 Score = 1157 bits (1282), Expect = 0.0 Identities = 727/784 (93%), Gaps = 0/784 (0%) Strand=Plus/Minus Query 39194 AAGCCGGATCTGGACTTCAACAACACCGACTGGGCTTATGGGGTGATTCGATGAAATCTC 39253 ||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct 72654537 AAGCCAGATCTGGACTTCAACAACACTGACTGGGCCTATGGGGTGATCCGATGAAATCTC 72654478 Query 39254 TTGCAGAGCAGATGCGTAACCACGACCGCGAGCAGATGAGCCGCATGGCCCATAACCTGC 39313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 72654477 TTGCAGAGCAGATGCGTAACCACGACCGCGAGCAGATGAGCCGCATGGCCCATAACCTGC 72654418 Query 39314 CAGAGCAGTACCAGGAGCGTGCGCCGGTCGAACAAGTGGCGCAGGTATTCAACAAGCTGT 39373 ||||||||||||||||| | ||||||||||| || ||||||||||||||||||||||||| Sbjct 72654417 CAGAGCAGTACCAGGAGTGCGCGCCGGTCGAGCAGGTGGCGCAGGTATTCAACAAGCTGT 72654358 Query 39374 TCAACGAGCTGCGCGCCGCTTTCCCGGCCAGTATGGCAAACTTCCGCACCCAGGATGACC 39433 ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| |||| Sbjct 72654357 TCAACGAGCTGCGCGCCGCGTTCCCGGCCAGCATGGCGAACTTCCGCACCCAGGAAGACC 72654298 Query 39434 TGAACGAATTCCGCCGTCAGTGGCTGCTGGCGTTTCAGGAGAACGGGATCCACACCATGG 39493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 72654297 TGAACGAATTCCGCCGTCAGTGGCTGCTGGCGTTTCAGGAGAACGGGATCCACACCATGG 72654238 Query 39494 CTCAGGTCGATGCCGGCATGCGTGTAGCTCGCCGCCAGGAGCGTCCATTCCTGCCGTCTC 39553 |||||||||||||||||||||| | || |||||||||||||| |||||||||||||| | Sbjct 72654237 CTCAGGTCGATGCCGGCATGCGCATTGCCCGCCGCCAGGAGCGCCCATTCCTGCCGTCGC 72654178 Query 39554 CGGGCCAGTTCGTCGCCTGGTGCAAACAGAGCGGCGGCGCGCTGGGTATCACCGTTGACC 39613 ||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||| Sbjct 72654177 CGGGCCAGTTCGTCGCCTGGTGCAAGCAGAGCGGCGGCGCGCTGGGCGTCAACGTTGACC 72654118 Query 39614 AGGTGATCACCGAATACTGGGACTGGCGTAATCGTTCGTTCGAATTCACCTCTAGCGAGC 39673 |||||||| |||| |||||||| ||||||||||||||||||||||||| ||| ||||||| Sbjct 72654117 AGGTGATCGCCGAGTACTGGGAATGGCGTAATCGTTCGTTCGAATTCATCTCCAGCGAGC 72654058 Query 39674 AATTTCCCTGGTCTCAGCCGGTCATGTACCACATCTGCGTAGAACTGCGCCACCGCAGCA 39733 ||||||| ||||| |||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct 72654057 AATTTCCATGGTCGCAGCCGGTCATGTACCACATTTGCGTAGAATTGCGCCACCGCAGCA 72653998 Query 39734 CTGAGCGCCAGTTAACGCATGGTGAGCTGTCGCGCGAAGCAGGCGACCTGCTGGACATGT 39793 | ||||||||||||||||||||||| ||| | ||||| |||||||| ||||||||||||| Sbjct 72653997 CCGAGCGCCAGTTAACGCATGGTGAACTGGCACGCGAGGCAGGCGATCTGCTGGACATGT 72653938 Query 39794 GGGAGAAGCGAGTCATGGAGGGTAAGCCAGTGCCGCCGGTACGCCGGGCAATTGCAGCGC 39853 |||| | ||| |||| |||||||||||||||||||||||||||||||| ||||| || | Sbjct 72653937 GGGAAAGGCGCGTCACCGAGGGTAAGCCAGTGCCGCCGGTACGCCGGGCTATTGCCGCAC 72653878 Query 39854 CTGCCGCAGAGCATGGGCCTACGCCGATCCAGCTGCTCCAGGCGAAGTACAACCGCAACA 39913 | || || ||||| ||||| ||||||||||||||||| | ||| |||||||||||||||| Sbjct 72653877 CAGCTGCCGAGCAAGGGCCGACGCCGATCCAGCTGCTGCTGGCCAAGTACAACCGCAACA 72653818 Query 39914 AATCGAACGGGATGGTGTGAGATGACCATAACAATCCGTGGGCAGATTCTTGCAGCCCTG 39973 | |||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||| Sbjct 72653817 AGTCGAACGGGATGGTGTGACATGAACATAACAATCCGCGGGCAGATTCTTGCAGCCCTG 72653758 Query 39974 CGTA 39977 |||| Sbjct 72653757 CGTA 72653754 Score = 549 bits (608), Expect = 6e-152 Identities = 536/688 (78%), Gaps = 22/688 (3%) Strand=Plus/Plus Query 47223 GAGCCTCGCAATAGCGGGGCTTTTTTATG-------------CGCATCTCACGCGCATCT 47269 ||||||||| || |||||||||||||||| |||||||||||||||| | Sbjct 78019871 GAGCCTCGCGAT-GCGGGGCTTTTTTATGTCCGCAGTAAACGCGCATCTCACGCGCATAT 78019929 Query 47270 CAACGAGAGCCTTTCAGTAAGCGAGCCTGAGAAATGCCGTTATAGGTGGCGACCTCTCTC 47329 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 78019930 TAACGAGAGCCTTTCAGTAAGCGAGCCTGAGAAATGCCGTTATAGGTGGCGACCTCTCTC 78019989 Query 47330 GGGCGGCTTTTCTGTGAGACAGGCTCACTTTCTAAAAGGTAAAGACGCTATGAATAATCC 47389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 78019990 GGGCGGCTTTTCTGTGAGACAGGCTCACTTTCTAAAAGGTAAAGACGCTATGAATAATCC 78020049 Query 47390 GTCAGTTATTCCGGCCTTTGACTTCCGAGAAATGGTGCAAG-CCAAAAACGGAGAGGTCG 47448 |||||||||||||||||| |||||||| |||||||| || | || || || | Sbjct 78020050 GTCAGTTATTCCGGCCTTCGACTTCCGCGAAATGGT-CACGACCCTCGACAACAAGATAA 78020108 Query 47449 TTACCACATCCCGAAAAGTTGCCACGTACTTCGGAAAGCGACATGGTGATGTGCTCAGGA 47508 | |||||||| | || || || ||||| || |||||||| || || | | Sbjct 78020109 TCACCACATCACTCAAGGTGGCGGATTACTTTGGCAAGCGACACAAAGACGTTTTGCGTG 78020168 Query 47509 AAATCGAGCAGGTTAAGGCCGATTGCTCAAGTGAGTTTAGCCAACGCAATTTTGCGTCGG 47568 || | | ||| | ||||| ||| || | ||| |||||||||||| | Sbjct 78020169 CCAT-----ACG-TAACCTGAAATGCTCCGATGACTTCACCCAGCGCAATTTTGCGCCCA 78020222 Query 47569 CCGATTATATCGATGAGCAGGGTAAGGTTCGCCCGATGTATAGCCTGACGAAAGATGGCT 47628 |||| || ||| | | || | |||| || ||||||| | | || || || | Sbjct 78020223 TTGATTTCATTGATAAAAATGGCGATGTTCAGCCTATGTATAACATCACCCGCGACGGAT 78020282 Query 47629 GGATCATGGTTGTGATGGGGTTCACCGGGAAAGCTGCTGCGGCTATCAAAGAAAGCTACA 47688 | || ||| | |||||||| ||||| || ||| | ||||| || | || || | |||| Sbjct 78020283 GCATGATGCTAGTGATGGGATTCACTGGCAAAACAGCTGCCGCAGTGAAGGAGTGTTACA 78020342 Query 47689 TTTCAGCTTTCAATTGGATGTCTGAGCAACTTAGCCGTCGCCTGGCCATGGGTGAAGAAA 47748 | || ||||| |||||| | ||||| || | ||| ||| |||| |||||||||||| Sbjct 78020343 TCAATGCCTTCAACTGGATGGCCGAGCAGCTAAACCGGCGCATGGCGATGGGTGAAGAAT 78020402 Query 47749 TGCAGCACCGCTACGCCATCAAAGAAACGCGCTCAAAGTTGAAGGGCACGATCGGCAGCC 47808 ||||||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||| Sbjct 78020403 TGCAGCATCGCTACGCCATCAAAGAAACGCGCTCAAAGCTGAAAGGCACGATCGGAAGCC 78020462 Query 47809 GGTTGATGAACGAGCGGAAGAAAGAGAAACGTGTTCTGGCTGTGGAGCATGAGCACATCA 47868 | |||||||||||||||||||||||||| || || |||| | || ||||||||||||| Sbjct 78020463 GTTTGATGAACGAGCGGAAGAAAGAGAAGCGCGTCCTGGAGCTCGAACATGAGCACATCA 78020522 Query 47869 TGCAGGTAACGCAGCCTGAATTGCTGAT 47896 |||||||||||||||| |||||| |||| Sbjct 78020523 TGCAGGTAACGCAGCCAGAATTGTTGAT 78020550 Score = 416 bits (460), Expect = 9e-112 Identities = 241/248 (97%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 41142 TAGCACTGGCATCGCTCGAAGTGGAGGCTGTGGCGTGGCTACTGTCAGGCGGCGGCGCAA 41201 |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 72653616 TAGCGCTGGCATCGCTCGAAGCGGAGCCTGTGGCGTGGCTACTGTCAGGCGGCGGCGCAA 72653557 Query 41202 AAAACAACGTCAGCTTCGATAGTGGCAATGCTTATGCCGACCCGCTGCGAGAAGTAACGC 41261 ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 72653556 AAAACAACGTCAGCTTCGATAGTGGCAATGCTTATGCCGCCCAGCTGCGAGAAGTAACGC 72653497 Query 41262 CGCTTTACACCGCCCCGCCAGCGCCGGTATCTGTGCCCGCTGCGATGGAAATGGATGATG 41321 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 72653496 CGCTTTACACCGCCCCGCCAGCGCCGGTATCTGTGCCCGCTGCGATGGAAATTGATGATG 72653437 Query 41322 ACTTTGACAGCGCGTTTGAACACGGAAAAGCTGTCGGCTGGAACGCCTATCGCGCAGCCA 41381 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 72653436 ACTTTGACAGCGCGTTTGAACACGGAAAAGCTGTCGGCTGGAACGCCTATCGCGCCGCCA 72653377 Query 41382 TGCTTCAG 41389 |||||||| Sbjct 72653376 TGCTTCAG 72653369 Score = 370 bits (410), Expect = 3e-98 Identities = 288/343 (84%), Gaps = 0/343 (0%) Strand=Plus/Minus Query 37643 CTGGCACCGGCAATCATGGCCGTGCTGCCGCTGGAGTACCGCAACCGCCTGGCACCGCAG 37702 ||| | |||||||||||||| || || || | |||| || | |||||||| |||||| Sbjct 72655729 CTGACCCCGGCAATCATGGCTGTTCTTCCTGTTGAGTTTCGTACACGCCTGGCGCCGCAG 72655670 Query 37703 AACGACACGATGTCGCTAATCGCCTCTGCAATGAAAGAGTGTGCCGAGGCTAAACAGGCC 37762 |||||||| |||||||| ||||| ||||| ||||| || ||| | || || || || ||| Sbjct 72655669 AACGACACCATGTCGCTGATCGCATCTGCCATGAAGGAATGTTCAGAAGCAAAGCAAGCC 72655610 Query 37763 GTGCTGCTGGACGCTCCAGAGCATCAGAAGCTGAAAGAGGTAAGCGAGGGTATAGCGTCG 37822 || || ||| |||| || ||||| ||||| |||| |||||||||||||| |||||||| Sbjct 72655609 GTTCTCCTGAACGCGCCTGAGCACCAGAAAATGAAGGAGGTAAGCGAGGGCATAGCGTCA 72655550 Query 37823 CTGTTCCGCCTCATGCCGGAGCAGGTAGGGCCGTTGATGACGATGGTGACGTCGATGCTG 37882 |||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||| Sbjct 72655549 TTGTTTCGCCTCATGCCGGAGCAGGTAGGACCGCTGATGACGATGGTTACATCGATGCTG 72655490 Query 37883 GGGGTTATGTGAGAGGCACCAGAAAAGAAAAAGCCCTTGAAGCGGTCACTTCAAAGGCCT 37942 |||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 72655489 GGGGTTATATGAGAGGCACAAGAAAAGAAAAAGCCCTTGAAGCGGTAACTTCAAAGGCCC 72655430 Query 37943 TCCAAACACTGTGTTACGCCAAGTAACGGGATTAATTATGGCA 37985 | ||||||||||||| |||||||||||| ||| |||| || Sbjct 72655429 TTATCACACTGTGTTACGGCAAGTAACGGGAGTAAGTATGTCA 72655387 Score = 183 bits (202), Expect = 1e-41 Identities = 127/144 (88%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 42870 CGCGTCATCTCAAACGAAATCTTCCGCGTTCCGGCGCGCCGTCAGCGCAAGCCTGCGGTT 42929 ||||||||| ||||||||||||| ||||||||||||||||| ||| ||||| |||||| Sbjct 72652321 CGCGTCATCACAAACGAAATCTTTCGCGTTCCGGCGCGCCGCAAGCCTAAGCCCGCGGTT 72652262 Query 42930 AAGCCTTCCGACATCCCGACTTTCAAGGACTACACCGCCCGCCTGGTGGATCAGAAATGG 42989 ||||| ||||| |||||||| | || ||||||||||||||||||||||||||||||||| Sbjct 72652261 AAGCCATCCGATATCCCGACCCTGAAAGACTACACCGCCCGCCTGGTGGATCAGAAATGG 72652202 Query 42990 CTGCGTCTCGCGGCACGGAGGAAA 43013 ||||| |||||||| |||| ||| Sbjct 72652201 CTGCGACTCGCGGCGAGGAGAAAA 72652178 Score = 174 bits (192), Expect = 5e-39 Identities = 131/151 (87%), Gaps = 6/151 (4%) Strand=Plus/Minus Query 42254 ATCAAACCGCCATAATCA---TGTCATCGGAGCCTGAACAACTCCGGT-GACTTCTGCGC 42309 ||||| |||||||| | || || ||| |||||||||| | || ||||||||||| Sbjct 72652960 ATCAACGAGCCATAATAAATCTGCCAGCGG--CCTGAACAACCCTGGCAGACTTCTGCGC 72652903 Query 42310 ATTTAAGGGGACTTAAATGCGACCACAATCTGAACTCCTCACCTTGTCACAGATGCAGAA 42369 ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct 72652902 ATTTAAGGGGACTTAAATGCGACCACAATATGAACTTCTCACCTTGTCACAGATGCAGAA 72652843 Query 42370 ATGCACCTGCGATTTTCTGCATTCTGCGTTT 42400 ||||||||||||||||||| ||||| || || Sbjct 72652842 ATGCACCTGCGATTTTCTGTATTCTTCGGTT 72652812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158521552938900