Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq5 91.5 1e-13 >seq5 Length=28395245 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || || | ||| | || | ||| ||||| || || ||||| || ||||| || | | Sbjct 9220507 CCACCCCTGAGACGCAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAG 9220566 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| |||| ||||| || ||||| |||| | ||| ||||| || ||| Sbjct 9220567 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 9220626 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || || || | || | || || | || || Sbjct 9220627 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTATCGCTGGGCTCGACC 9220686 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGC 101477 || || |||| || ||||| || | || || ||||| ||||||||| || ||| Sbjct 9220687 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGTTTGCGC 9220741 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || || | ||| | || | ||| ||||| || || || || || ||||| || | | Sbjct 9215819 CCACCCCTGAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 9215878 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| |||| ||||| || ||||| |||| | ||| ||||| || ||| Sbjct 9215879 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 9215938 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || || || | || | || ||| | || || Sbjct 9215939 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTATCACTTGGCTCGACC 9215998 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTT 101473 || || |||| || ||||| || | || || ||||| ||||||||| || Sbjct 9215999 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGTTT 9216049 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || || | ||| | || | ||| ||||| || || || || || ||||| || | | Sbjct 9219595 CCACCCCTCAGACGCAGGACAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAG 9219654 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| |||| ||||| || ||||| |||| | ||| ||||| || ||| Sbjct 9219655 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 9219714 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || || || | || | ||||| | || || Sbjct 9219715 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCGACC 9219774 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| || || ||||| | || || ||||| |||||||| Sbjct 9219775 TCGAGGGTGATGGTCTTACCGGTGAGGGTCTTGACAAAGATCTGCAT 9219821 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| || || | ||| | || | ||| ||||| || || || || || ||||| || | Sbjct 9219821 TTCCACCCCTGAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 9219880 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 || || | | |||| |||| ||||| || ||||| |||| | ||| ||||| || | Sbjct 9219881 AGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGG 9219940 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||||||||| || || || || || || || | || | ||||| | || | Sbjct 9219941 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCGA 9220000 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 | || | |||| || ||||| || | || || ||||| ||||||||| Sbjct 9220001 CCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCATG 9220050 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || || | ||| | || | ||| ||||| || || || || || ||||| || | | Sbjct 9215363 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 9215422 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| |||| ||||| || ||||| |||| | ||| ||||| || ||| Sbjct 9215423 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 9215482 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || || || | || | ||||| | || || Sbjct 9215483 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACC 9215542 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || | |||| || ||||| || | || || ||||| ||||||||| Sbjct 9215543 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCATG 9215590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278279258925