Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq20 141 1e-28 >seq20 Length=28185029 Score = 141 bits (156), Expect = 1e-28 Identities = 490/743 (66%), Gaps = 26/743 (3%) Strand=Plus/Plus Query 160228 CTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATT 160287 |||||||| || ||||||||| | | || | ||||||||||| || || ||||| | Sbjct 11632575 CTTCGTAG--CT-CCACTTCACCACACGAGCGAAGGCCTGCATGTCTGACGTATCGTACT 11632631 Query 160288 TGTACATCAGG-GGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGG 160346 || | | || || | | ||||||||| |||||| | | ||| |||||||||| | Sbjct 11632632 TG-ATGTTAGCAGGCAGTGATCCGGGAACGGAGGGCATCCTCATTAGCGTGGCCCACAAG 11632690 Query 160347 TGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAAC-CTGTC 160405 || || || |||||||| |||||||| ||| |||| || | || || | |||| Sbjct 11632691 TGCTCATCAGGGCTGTATGTGTCCTTCTCCCACTCCAA-AAGTTTCTGAACCTCTCTGTT 11632749 Query 160406 CCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATAT 160465 | || || || | || | | |||||| || |||||||| || | || || || || Sbjct 11632750 CTCCATCACATGTTTCACAAAAGCTCTGGTGACCACAAAGTAAGCATTTCCTGAAAACAT 11632809 Query 160466 CGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGAC---ACCACTCCTTT 160522 || || || ||||| | | |||| |||| || || | | | || | | | Sbjct 11632810 GGGGCTGTTAATGGGCGGGG-GACTTT-TCCTCACA----TTCGTCCTGATGACGC-TGT 11632862 Query 160523 CACCAGCGC-GTGTCGCTTCTTCCACCTGACCATCTTGTG--CGGTGGCATGCGTTCCGT 160579 || | || | | || ||| | | || | |||| | ||| || || | Sbjct 11632863 CAGTGACATTGTAATGATACTGCCAACGGGCCTTTTTGTAGTCATTGG--TGGTCTCAGA 11632920 Query 160580 CTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTT 160639 ||| | || || || | ||| | ||||| ||| | ||||| || || || Sbjct 11632921 CTCCATGCTATTCCTCCCATTGAGGGCCTTCAGTACCTTAATTATCTCACCATTGGTTTT 11632980 Query 160640 GAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGC-TCAGGTCGT 160698 || || ||||| || ||||| ||| | || ||| |||| || | | || || Sbjct 11632981 GATGGGGAAGTCCGTCCCGCAGGTGTTAAGCATGTATCTCCACTTGACATGTGAGCTCA- 11633039 Query 160699 GCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGT 160758 |||| || |||||||| || | |||||||||||| ||| ||| || || || | || Sbjct 11633040 GCAGATCTCTCATGCAGTTCAAATCTGCCTGCACCCGGGACCATGAGGCATATATCACTC 11633099 Query 160759 TCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCA 160818 | |||| | || |||| ||||| |||||| || || || || ||| || |||| |||| Sbjct 11633100 TTTCTAATCTAGTGGCTACAAACACGTTAGGCAAGCAGGAAACCATTGCCTCCACAGCCA 11633159 Query 160819 GAAAGAACATCTTATCCGCCTTTC-GGTCCACGTGCACGCAATACAGGTTCTGAGGCGCG 160877 || |||| | | |||| |||||| ||||| || || | ||||||||| | | Sbjct 11633160 -TCTTAAATTCTTGTGAGGATTTCTTGTCCACATGCACACAGTAGATGTTCTGAGGAGTG 11633218 Query 160878 TAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAG 160937 || || || | || | | ||| |||||||| ||||| | ||||||||| || |||||| Sbjct 11633219 TAAATAGCTCGCAGAAGTCGCTCAAACATCTCAATCTTCTCATGGATCACCATGGAGTAG 11633278 Query 160938 GCTATCGGAAACTCGGTCTCCTC 160960 || || ||||| || |||| || Sbjct 11633279 GCAATGGGAAAATCCTTCTCTTC 11633301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577219019619000