Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4 116 1e-20 >seq4 Length=27622843 Score = 116 bits (128), Expect = 1e-20 Identities = 430/673 (64%), Gaps = 3/673 (0%) Strand=Plus/Minus Query 155474 TGGGTAAAAATTCACATCAATAATGTTATTTAAATTTGTAACCAATACCTTGGTTACGTC 155533 |||||| | || | || ||||| || || || ||| | || | ||| ||||| || Sbjct 17919575 TGGGTAGTAGTTAATTTCGATAATCTTGTTCAAGTTTTTGACGATTACTTTGGTCACAAA 17919516 Query 155534 TGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAATAGA 155593 ||||| ||| | ||||||| || || | || |||| || | || || Sbjct 17919515 TGCTAGTTTTTTAAAGTCAAAAGTCCGCTCAGGGGTGACGTACATGTTGAGCGCGATGGA 17919456 Query 155594 CGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAGCACAG 155653 ||||||||||| ||||| ||| | |||| | |||| || || || || ||| || Sbjct 17919455 GGCCAGATTACACACCGCTACCTCATCGTCGCTGGTGTACTCAACTATTTCTGTGCAGAG 17919396 Query 155654 GTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTT 155713 ||| || ||||||||||| | ||||| |||||| || ||||| || || || || Sbjct 17919395 GTTGCTGCTTTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTT 17919336 Query 155714 GTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAGGTC 155773 ||| || ||||| || || || || || |||| | || | ||| |||| | | Sbjct 17919335 GTACAGCATGTACGGCGTACCGGTTTCTGTCTGGGACTCGATAATGGCGTGCCACACCTG 17919276 Query 155774 ACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAGCGTTCG 155833 | || || | ||| || |||||| ||||||| | | || ||| | Sbjct 17919275 CTGAGCCTTCACCACGCGCTTGACCCTCCCTTCCTTCTCATATGTGGTGTAAAGCTTCTC 17919216 Query 155834 GTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGCGACCA 155893 | | ||||| || | || || ||| |||||||||| | || || | ||| ||||| Sbjct 17919215 GAACTCCTCCCCCCAGCACTCGTCCAGCCCAGGGCACTCGTTCGGACACATCAGAGACCA 17919156 Query 155894 AATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAG 155953 | | || | || | || ||| || | || ||| || || |||||||| Sbjct 17919155 GTCTGTGTTGCTCTCCACTCTCTTCATGAACAGGTCTGGGATCCACATGGCGTAGAAAAG 17919096 Query 155954 GTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAAT 156013 ||| || ||| | |||||| | ||| |||||| ||||| ||||| || | Sbjct 17919095 GTCTCTGGCCCTCTGCTCCTCCTTTCCGGTGTTCTTCTTCAGCTCCAAGAAGTCAAACAC 17919036 Query 156014 ATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTC---TTGCCACCCTG 156070 ||| || |||||||| ||||| ||||| || |||| ||||| ||||| Sbjct 17919035 ATCGAAGTGCCAGGGCTCCAGGTACATGGCAAACGCTCCGGGCCTCTTGTTGCCTCCCTG 17918976 Query 156071 ATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGT 156130 || || || || ||||| || ||| |||| | ||||| || | | || ||||| | Sbjct 17918975 GTCGACGTAGCGCGCAGTGTTGTTGTAGACTCTCAGCATGGGGACGAGCCCGTTGGAGTT 17918916 Query 156131 GCCATTGGTTCCG 156143 ||| ||||| ||| Sbjct 17918915 GCCGTTGGTGCCG 17918903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817128558425