Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 5e-12 >seq5 Length=28395245 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||| || |||||||| || | || ||||| ||||| ||| |||| ||| | Sbjct 9220736 AACATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGCCC 9220677 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||||||| | | | || || ||||| || || |||||| | ||| ||| Sbjct 9220676 AGCGATACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGAT 9220617 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||||| || || | ||| || || |||||||| || | | || | | |||||| Sbjct 9220616 CAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTAC 9220557 Query 107733 AACATTCAAAAGGAGTCTAC 107752 ||||| ||||||||||| || Sbjct 9220556 AACATCCAAAAGGAGTCCAC 9220537 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/217 (69%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 107537 CATTTATAAGAGGTTTAAA-ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTA 107595 ||||| | | |||| ||| ||||| || |||||||| || | || ||||| ||||| | Sbjct 9216065 CATTTTTCACAGGTGCAAACATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCA 9216006 Query 107596 CCGTCGAAACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAG 107655 || |||| ||| | | ||||| | | | || || ||||| || || | Sbjct 9216005 CCCTCGAGGTCGAGCCAAGTGATACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGG 9215946 Query 107656 AAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCA 107715 ||||| | ||| ||||||||||| || || | ||| || || |||||||| || | | Sbjct 9215945 AAGGCATTCCCCCTGATCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCC 9215886 Query 107716 AAACAATGGCGGACTACAACATTCAAAAGGAGTCTAC 107752 || | | ||||||||||| || |||||||| || Sbjct 9215885 GCACCCTCTCTGACTACAACATCCAGAAGGAGTCCAC 9215849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876678467225