Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq7 95.1 2e-14 seq8 93.3 8e-14 >seq7 Length=25821574 Score = 95.1 bits (104), Expect = 2e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 58371 TAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGT 58430 |||| |||| | |||||||| | | |||||||| || || || | ||||| |||| Sbjct 16786230 TAGCAGGAGCTCTGTGGTGGTATTTCGTCTCTAAAGGCATCGAGTATCTGGATACGGTGT 16786289 Query 58431 TTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTA 58490 ||||||| || |||||||| || || || |||| || || ||||| || || || | | Sbjct 16786290 TTTTCATCCTGAGGAAAAAATTCAACCAGGTTACTTTCCTGCACGTCTACCACCACTGCA 16786349 Query 58491 CTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 | ||||| || | | ||| | || || |||||| | |||||||| ||| Sbjct 16786350 CCATGTTCACACTCTGGTGGATCGGCATCAAATGGGTGGCAGGAGGACAG 16786399 >seq8 Length=22893611 Score = 93.3 bits (102), Expect = 8e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 |||||||||||||| || ||||| | || | | | || ||||| |||||||| || ||| Sbjct 8944299 TGGTGGTACTATATCTCCAAAGGAGTGGAGTTCCTGGACACAGTCTTTTTCATCCTGAGG 8944240 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504 || ||||| || || || ||||| || ||||| || ||||| | || ||||||| | Sbjct 8944239 AAGAAGTTAAACCAAGTCAGCTTCCTCCACGTCTACCATCACTGCACCATGTTTATCCTC 8944180 Query 58505 GGATGGGTAGGTATTAAATGG 58525 | ||| | || || |||||| Sbjct 8944179 TGGTGGATCGGCATCAAATGG 8944159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903410917684000