Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq3 123 3e-23 >seq3 Length=23234908 Score = 123 bits (136), Expect = 3e-23 Identities = 358/539 (66%), Gaps = 29/539 (5%) Strand=Plus/Minus Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005 ||||| || | || || ||| |||||| |||||| ||||| ||||||||| ||| | Sbjct 15679140 GCCAGCTCCTTGGGCGAGGTGAAGTCGTCCACGTGGATGAAGGCGTCTCCCTGGATAAAG 15679081 Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATA-AGAGA 177064 || ||||| |||| || | | || || || | || || | || || | |||| Sbjct 15679080 TTCTCGTAGTTCTGCCTGGGCGGACCAAGAACCACTGGCACTGTCCC---CACAGAGAGT 15679024 Query 177065 TCG--GTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAG 177122 | ||| |||||||| ||||| |||||| |||| | |||||||||||| || || ||| Sbjct 15679023 GGGTTGTACAGTTTTTCAGTAATGTAGTCCTTGTGGATGGAGTTCTCAAAAGCCAGGTAG 15678964 Query 177123 AATTTACAG--GAAGATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTA 177180 || |||||| | ||| || |||| | |||| | || | || || || || | Sbjct 15678963 AACTTACAGCTGGCGATGGT--GGGGAAGTAGTCTTGGTCAGAGATGTACTCCCCGAAGG 15678906 Query 177181 CGTTCCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGATCTCA 177240 | | || || | || | || |||||||| ||||| ||||||| || | || Sbjct 15678905 CTTGTCCATACGCGTGAACCTCAATGTGTTTGTACAGCTCATTGTAGTATTTCACCCGCA 15678846 Query 177241 CGTGGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGCGGGAACGG 177300 ||||||| | |||||| ||||| || | |||||| | | |||| | ||||| || || Sbjct 15678845 CGTGGTCCTGGTTCCAGTTGCTCACAATCCAGCAGATCAGCTTG-TTTTTGCTGG-GTGG 15678788 Query 177301 GATTCGATACTAATGCAGTGTCTCTGAGC-GTT---AGTGATCCATAGGGCACGTGAATA 177356 || | || | | | || ||| | | | || ||||| ||||| | ||| Sbjct 15678787 GACAAAGTCCTCA-----TCGCCCTCAGCTGCTACGATGGACCCATAAGGCACTTCAATG 15678733 Query 177357 TCCGAGTCGCGTCTGTACGTTAACGTGAGATTGAAAAGGTTTTCTATACCTTG----TTT 177412 || | || | | ||| | | || |||||||| | ||| || || || | | Sbjct 15678732 TCAGCATCCTGACGGTAATTGAGAGTCAGATTGAACATGTTCTCGATCCCAGGCAGCTGG 15678673 Query 177413 GAAGGGGCTGTTACTGGGCGATTCTAAGTTCATCCATATCCACTTTTGAAAGGTTGGTC 177471 |||| | || || ||||| || |||||||||||||||||||| || |||| ||||| Sbjct 15678672 GAAGAG--TGCGAC--GGCGACTCCAAGTTCATCCATATCCACTTCTGGAAGGATGGTC 15678618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578431819240000