Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq9 149 7e-31 >seq9 Length=16453912 Score = 149 bits (164), Expect = 7e-31 Identities = 141/180 (78%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || | ||| || | ||||||||| || || | |||||||| || ||||| Sbjct 11070865 CTTGAGTCCTGTGATGTGTGCGATCATGTAGGTAAGAAGTGCATAGCTGGCAATATTGAA 11070806 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || ||||| |||||||| || ||||| | |||||||||||| ||||| ||||| ||||| Sbjct 11070805 AGGCACCCCGAGGCCCATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCACCGTC 11070746 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGC 147161 |||||| ||||| |||||| |||||| || ||||| |||||| ||||| ||| || Sbjct 11070745 ACACACGTAGAACTGACACAGGGCGTGGCAGGGGGGCAGAGCCATGTTGGGCATGTCTGC 11070686 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/147 (76%), Gaps = 6/147 (4%) Strand=Plus/Minus Query 147276 GTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTT 147335 |||| ||| |||||||||||||||||||| |||||||| || ||||||||||| || Sbjct 11069764 GTACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGTCCCAGGTCGCCTTCCTC 11069705 Query 147336 TCTGTGCGAGAAGCCCGCCCGCTTG---AGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392 ||||| | ||| |||| | ||| || || || |||| |||| ||| |||||||| Sbjct 11069704 TCTGTCTGTGAA-CCCG--AGGTTGTCCAGGAAGTCCCGGGATCCGTTGGCATCCCAGAT 11069648 Query 147393 GCCCACTCCCTTGGCGGAGAGCTCCTT 147419 ||| || || || |||||||| || Sbjct 11069647 CTTCACACCTTTCGCCGAGAGCTCTTT 11069621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487817660000