Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq10 131 2e-25 seq5 113 4e-20 >seq10 Length=23202889 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || | || ||||||||||| || || || Sbjct 4415817 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAA 4415758 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | || | || |||||||||| |||||| || | | | Sbjct 4415757 GATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCTTTGACATT 4415698 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||||||| | |||||||||| ||||| || ||||| |||| || ||||| Sbjct 4415697 TTCAATGGTGTCGCTGGGCTCCACCTCCAAGGTGATGGTCTTACCAGTCAGGGTCTTCAC 4415638 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 4415637 AAAGATCTGCAT 4415626 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | || || | || |||||||||||||| || || Sbjct 4416045 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCCAGCTGCTTACCGGCGAA 4415986 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | || | || |||||| ||| |||||| ||||| | Sbjct 4415985 GATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTT 4415926 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | |||||||||| ||||| || ||||| || | ||||| || Sbjct 4415925 CTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTGAGGGTTTTGAC 4415866 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 4415865 GAAGATCTGCAT 4415854 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | || || | || ||||||||||| || || || Sbjct 4416273 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAA 4416214 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | || | || |||||| ||| |||||| || | | | Sbjct 4416213 GATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTAGCTTTGACATT 4416154 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||||||| | |||||||||| ||||| || ||||| || | ||||| || Sbjct 4416153 TTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTGAGGGTTTTGAC 4416094 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 4416093 GAAGATCTGCAT 4416082 >seq5 Length=28395245 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 9215398 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 9215457 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | |||| || ||||||||| |||||| ||||| | Sbjct 9215458 GATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 9215517 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||||| ||||| || || || |||| || || || Sbjct 9215518 CTCAATGGTGTCGCTGGGCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTGAC 9215577 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 9215578 AAAGATCTGCAT 9215589 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 9219858 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 9219917 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | |||| || ||||||||| |||||| ||||| | Sbjct 9219918 GATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 9219977 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||||| ||||| || || || |||| || || || Sbjct 9219978 CTCAATGGTGTCGCTGGGCTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTGAC 9220037 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 9220038 AAAGATCTGCAT 9220049 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 9220086 CTCCTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 9220145 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | |||| || ||||||||| |||||| ||||| | Sbjct 9220146 GATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 9220205 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || ||||| |||| || || || Sbjct 9220206 CTCAATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTAAC 9220265 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 9220266 GAAGATCTGCAT 9220277 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 9220314 CTCCTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 9220373 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | |||| || ||||||||| |||||| ||||| | Sbjct 9220374 GATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 9220433 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || ||||| |||| || || || Sbjct 9220434 CTCAATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTAAC 9220493 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 9220494 GAAGATCTGCAT 9220505 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 9219630 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 9219689 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | |||| || ||||||||| |||||| ||||| | Sbjct 9219690 GATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 9219749 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || ||||| || | || || || Sbjct 9219750 CTCAATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTACCGGTGAGGGTCTTGAC 9219809 Query 35725 AAATATCTGCATTC 35738 ||| |||||||||| Sbjct 9219810 AAAGATCTGCATTC 9219823 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 9220542 CTCCTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 9220601 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | |||| || ||||||||| |||||| ||||| | Sbjct 9220602 GATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 9220661 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || ||||| | || ||||| | ||||| || || || || | || || || Sbjct 9220662 CTCAATGGTATCGCTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 9220721 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 9220722 AAAGATCTGCAT 9220733 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 9215854 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 9215913 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | |||| || ||||||||| |||||| ||||| | Sbjct 9215914 GATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 9215973 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || || || | || ||||| | ||||| || || || || | || || || Sbjct 9215974 CTCAATGGTATCACTTGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 9216033 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 9216034 AAAGATCTGCAT 9216045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793459127000