Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq9 122 8e-23 >seq9 Length=16453912 Score = 122 bits (134), Expect = 8e-23 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 34302 CCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTC 34361 |||| ||||||||| | || |||||||||||||| || |||| || || ||||| | Sbjct 11069619 CCAAAGAGCTCTCGGCGAAAGGTGTGAAGATCTGGGATGCCAACGGATCCCGGGACTTCC 11069678 Query 34362 TGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCC 34421 ||||||| | |||||| || | ||||| |||||| |||| || || |||||||||| Sbjct 11069679 TGGACAACCTCGGGTTCACAGACAGAGAGGAAGGCGACCTGGGACCTGTGTACGGGTTCC 11069738 Query 34422 AGTGGAGACACTTTGGGGCGGAGTA 34446 ||||||| |||||||| || ||||| Sbjct 11069739 AGTGGAGGCACTTTGGTGCCGAGTA 11069763 Score = 122 bits (134), Expect = 8e-23 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 ||||| || |||||||| ||||||||||||||||| || || |||| |||||| ||||| Sbjct 11069763 TACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGTCCCAGGTCGCCTTCCTCT 11069704 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | || |||||| | |||||||| ||||| || || |||| || |||||||||||| Sbjct 11069703 CTGTCTGTGAACCCGAGGTTGTCCAGGAAGTCCCGGGATCCGTTGGCATCCCAGATCTTC 11069644 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGG 7043 || || | ||||||||| |||| Sbjct 11069643 ACACCTTTCGCCGAGAGCTCTTTGG 11069619 Score = 111 bits (122), Expect = 1e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 34577 ATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCC 34636 ||||| || ||||| |||||| |||| || || |||||||| | || |||||||| Sbjct 11070701 ATGGCTCTGCCCCCCTGCCACGCCCTGTGTCAGTTCTACGTGTGTGACGGTGAGCTGTCG 11070760 Query 34637 TGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGT 34696 || ||||| || || || ||||| || ||||| | |||||||| ||||| ||||| || Sbjct 11070761 TGTCAGCTGTACCAGCGCTCGGGTGATATGGGCCTCGGGGTGCCTTTCAATATTGCCAGC 11070820 Query 34697 TACGCTCTGCTCACGTACATGATCGCTCA 34725 || || || || || ||||||||||| || Sbjct 11070821 TATGCACTTCTTACCTACATGATCGCACA 11070849 Score = 111 bits (122), Expect = 1e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| || || || || || || ||||| ||||| |||||||| | ||| Sbjct 11070849 TGTGCGATCATGTAGGTAAGAAGTGCATAGCTGGCAATATTGAAAGGCACCCCGAGGCCC 11070790 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 || || ||||| || || || ||||| || |||||||| || | |||||||| || Sbjct 11070789 ATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCACCGTCACACACGTAGAACTGA 11070730 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCAT 6768 || |||| |||||| ||||| || ||||| Sbjct 11070729 CACAGGGCGTGGCAGGGGGGCAGAGCCAT 11070701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262259918000