Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq10 107 1e-18 >seq10 Length=23202889 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||||||||| || || || ||||| || || || || ||| Sbjct 4416082 ATGCAGATCTTCGTCAAAACCCTCACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAGC 4416141 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||||| | ||| || || || || || || | || ||||| || Sbjct 4416142 GACACCATTGAAAATGTCAAAGCTAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAG 4416201 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || ||||| || |||||||| | |||||| | ||| |||||| Sbjct 4416202 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTCTCCGACTACAAC 4416261 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 4416262 ATCCAGAAGGAGTCCAC 4416278 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||||||||| || || || ||||| || || || || ||| Sbjct 4415854 ATGCAGATCTTCGTCAAAACCCTCACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAGC 4415913 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || || || || || | || ||||| || Sbjct 4415914 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAG 4415973 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || ||||| || || |||||||| | |||||| | ||| |||||| Sbjct 4415974 CAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAAGATGGCCGCACTCTCTCCGACTACAAC 4416033 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 4416034 ATCCAGAAGGAGTCCAC 4416050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009497012700