Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicentrarchus_20labrax_20[genbank_20GCA_5F000689215.1_202014-04-09] 25 sequences; 675,917,103 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq18 170 3e-37 seq14 131 2e-25 seq10 89.7 7e-13 >seq18 Length=27569954 Score = 170 bits (188), Expect = 3e-37 Identities = 204/277 (74%), Gaps = 0/277 (0%) Strand=Plus/Minus Query 8309 CCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCGAACCCC 8368 |||| |||||| | ||||| || ||| | | ||| | ||||| || |||| ||| Sbjct 7566776 CCCTGGACGTTATTGCAGACAAGCCTCTGCAGGGAGGCGGTGTTGACAATGTCGAAGCCC 7566717 Query 8369 ACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATG 8428 ||| || ||||| |||||||||||||||||| | || ||||||||| ||| |||| Sbjct 7566716 ACGGTGCCTCCGAATGTGCTGGGCTTCCAGTACTCTGGTGAGCAGATGGGGTTTCCCATT 7566657 Query 8429 AGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTG 8488 | ||| ||||||||| | || ||||||| ||| | || |||| || |||||||| || Sbjct 7566656 AAGCCCTTGAGGGAGTAAGGGGCCCCCATCTCCACCATCGTCTCCCCAAAGATGGCATTA 7566597 Query 8489 GGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAA 8548 || | ||| || |||||||| | ||| | ||| ||||||||||| |||| || |||||| Sbjct 7566596 GGCCTGGGTTTCTCCACCAACAGTCCTGGGTAGAGCTCCACAGCGTCGATGTGTCCGTAC 7566537 Query 8549 AGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTG 8585 | || ||| || || || || |||||||||| Sbjct 7566536 ATCTCCTCGAGCAATGCGGCCATTTCTTTTTCTCCTG 7566500 Score = 118 bits (130), Expect = 2e-21 Identities = 179/253 (71%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 9235 CCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCT 9294 ||||| | ||||| || | |||||||| || ||||| ||| || || || | Sbjct 7564970 CCGATCAGAATGAGCCGTGAAGTCTGGAAAAGCCTTTCGTCGTCCCAGTCAGGGTGGACC 7564911 Query 9295 TGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATG 9354 | ||||| ||||| ||||||| ||||||||||| |||||||| |||||||||||||| Sbjct 7564910 TCCTTCAGCACATCACACACCCGGTTGTGTTCCCGTAGCCAGATCGTGGCGTACATCATC 7564851 Query 9355 AGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACT 9414 || || || |||||||| || ||||| || || ||||| | || ||| || || Sbjct 7564850 AGACCGGGGACCAGGCCGAACGCCTCGTGGCCCACAGCGAAGCGGTGAGCTTCAGGAACA 7564791 Query 9415 TCGGGAGGATAGATCATGT--GCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCAC 9472 | ||||| ||| ||| | ||||| || || || || | ||||| ||||| || | Sbjct 7564790 TGAGGAGGGTAGTGCATTTCAGCACC--CACTTCCTTTACTGTTGGGGGGTACATCTCTC 7564733 Query 9473 CGTCAATCATCTG 9485 | | | |||||| Sbjct 7564732 CATTCACCATCTG 7564720 >seq14 Length=28398722 Score = 131 bits (144), Expect = 2e-25 Identities = 199/281 (71%), Gaps = 3/281 (1%) Strand=Plus/Minus Query 8273 TCCTCAT--CG-GGAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACT 8329 ||||||| || ||||| |||| || | ||||||||| ||| |||| || || Sbjct 16404138 TCCTCATTTCGTGGAACGTGGAAGTCGACGTACGGACACCACTTTGTGTTGAGGCACACC 16404079 Query 8330 AGAGACTGAATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTG 8389 || || | ||| | | |||||||| ||| || ||||| || |||||||| Sbjct 16404078 AGTTTCTTCAGAGTAGACGTTTTGACGATATTGAAGCCAGTCTCTCCCCCAAAGGTGCTC 16404019 Query 8390 GGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGA 8449 |||||||||||| | |||||||||||| ||| ||| |||||||| |||||||| ||| Sbjct 16404018 GGCTTCCAGTACTCAGGGGAGCAGATGGGGTTTCCCAGCAGGCCTTTCAGGGAGAAGGGA 16403959 Query 8450 GCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAG 8509 ||||| | ||| | || |||||||| || ||| | | | ||| | || |||| || | Sbjct 16403958 GCCCCTATCTCAACCATACTCTCACCAAATATGCTGCTAGAACGTGTTTTCTCCAACAGG 16403899 Query 8510 AATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAG 8550 | |||| ||| | ||||| ||| || | ||| || || || Sbjct 16403898 ATACCGGGGTAAAACTCCAAAGCATCTATGTCACCATAGAG 16403858 Score = 122 bits (134), Expect = 1e-22 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 8351 TTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAG 8410 |||||||| | ||| || ||||| || |||||| | |||||||||||| | ||||| Sbjct 16407153 TTGACGATACTGAAGCCAGTCTCTCCCCCAAAGGTGGTCGGCTTCCAGTACTCAGGGGAC 16407094 Query 8411 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTC 8470 |||||| ||| ||| |||||||| |||||||| |||||||||| ||| | || ||| Sbjct 16407093 CAGATGGGGTTTCCCAGCAGGCCTTTCAGGGAGAATGGAGCCCCCATCTCAACCATACTC 16407034 Query 8471 TCACCGAAGATGGCGTTGGGACGGGGCTTTTC 8502 ||||| || ||| | || ||||| | |||||| Sbjct 16407033 TCACCAAATATGCCATTAGGACGTGCCTTTTC 16407002 Score = 96.9 bits (106), Expect = 5e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 9235 CCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCT 9294 || |||||||| |||| | || ||||| || ||||| || ||| ||||||||| Sbjct 16399568 CCAATAATGATAAGTCTGGCAGTTTGGAAGAGCTGCTCATCGTCCCAGGTGGGATGTTCT 16399509 Query 9295 TGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATG 9354 |||||| | || || | ||||| || ||||||||||| || ||||| ||||| || Sbjct 16399508 CCTTTCAGGATGTCACAGAGTCTGTTATGCTCCCTGAGCCATATGGTGGCATACATGGTG 16399449 Query 9355 AGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTT--TCGGGCA 9412 || || || | | |||||| ||| ||||| | | |||||||| | | | || || Sbjct 16399448 AGACCCGGCAGGATGCCAAATATCTCCTGACCAATAACCAGACGCTTCTCTGGAGGGACA 16399389 Query 9413 CTTCGGGAGGATAGATCATGTGCACCTGGACGTC 9446 ||| |||||| | ||||||||| |||| || Sbjct 16399388 CTT--TCAGGATACACCATGTGCACAGGGACCTC 16399357 >seq10 Length=23202889 Score = 89.7 bits (98), Expect = 7e-13 Identities = 187/279 (67%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 8271 GCTCCTCATCGGGAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTA 8330 |||| ||| | || |||| || || | | |||||| |||| ||| |||||| | Sbjct 9704638 GCTCTTCAGCTGGTACTCTAAATGCCACATAGGGACACGACTTGGTGTTTAGACAGACCA 9704697 Query 8331 GAGACTGAATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGG 8390 | || | || ||| || || || | || || || | || || ||||| |||| Sbjct 9704698 GCTTCTTTAGTGTGGCGGAGTTCACTATGTCAAAGCCGACTTTGCCTCCAAAGGTACTGG 9704757 Query 8391 GCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAG 8450 |||||||||| | || || || || ||| ||| ||||||||| |||||||| || | Sbjct 9704758 GCTTCCAGTATTCAGGAGAACATATAGGGTTTCCCAGGAGGCCTTTAAGGGAGAAGGGGG 9704817 Query 8451 CCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGA 8510 | |||| ||| | |||||||| || || |||| | || | | || |||| || | Sbjct 9704818 CACCCATCTCCACCATGCTCTCTCCAAATATGGTGCCGGCTCTTGTTTTCTCCAACATCA 9704877 Query 8511 ATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAA 8549 |||| | || | || | ||| || | ||| ||||||| Sbjct 9704878 ATCCAGGATAAAATTCAAGAGCTTCAATGTCACCGTAAA 9704916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716876575976000