Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq21 167 3e-36 >seq21 Length=24691485 Score = 167 bits (184), Expect = 3e-36 Identities = 143/177 (81%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| ||||| | ||||||| ||||||||| || |||| |||||| || |||||||| Sbjct 495380 CTTGAGTCCCGTAATATGGGCGATCATGTAGGTGAGGAGGGCGTAGCTTGCAATGTTGAA 495321 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 |||||| ||||| ||||||||||| ||||| |||||||| ||||| || ||||||||| | Sbjct 495320 GGGCACACCCAGGCCCATGTCCCCGGAGCGTTGGTACAGTTGGCATGACAGCTCCCCGTC 495261 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 |||||||||||||||| | ||||| || ||||| ||||| |||||||| Sbjct 495260 GATGACGTAGAACTGGCACAAGGCATGGCACGGTGGCAGAGCCATATGTGGCAGGTC 495204 Score = 89.7 bits (98), Expect = 6e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 145536 TTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTC 145595 ||| || ||||||| ||| ||||| | ||| || | |||| | | | | ||||||| Sbjct 496899 TTAAACTGCCATCTGCATTTTGATGGTGGGGTGAGGATTGTAGTCAACGATCTCAAAGTC 496840 Query 145596 CTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGG 145655 |||||| | |||||||||||| | |||||| |||||||||| | ||| |||| ||||| Sbjct 496839 CTCCGCACGGAAGTCATCTATTTTCTCCACAGTCCTCAGGATCTTCAGCTTGGGGAAGGG 496780 Query 145656 CCGG 145659 ||| Sbjct 496779 ACGG 496776 Score = 82.4 bits (90), Expect = 9e-11 Identities = 118/164 (72%), Gaps = 8/164 (5%) Strand=Plus/Minus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| | || |||||||||| ||||||||| || || || |||||||||||||| ||| Sbjct 494741 GTACTCAGCACCGAAGTGCCGCCACTGGAAACCATATACAGGCCCCAGGTCCCCTTCCTC 494682 Query 146100 C----CTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGA 146155 | ||||| ||||| | | | ||||| || || ||||| || || ||||| | Sbjct 494681 CCGATCTGTG---AAGCCC-ATCTTGTCCAGGAAATCTCGTGACCCATTTGCATCCCAAA 494626 Query 146156 TCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199 |||| || || || | |||||||| || | || || || ||| Sbjct 494625 TCTTTACACCTTTCTCAGAGAGCTCCTTTGCGTTTGTTGAGCCC 494582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590069283896760