Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq14 111 1e-19 seq7 95.1 1e-14 >seq14 Length=34043612 Score = 111 bits (122), Expect = 1e-19 Identities = 161/225 (72%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 20957 CAGCCTGAGCACCATATGCAAAGTGG-ACTCCTTTTGAATGTTATAGTCCGCCAGGGTTT 21015 ||| | |||||||| || | |||| ||||||| || ||||| ||||| | ||||| Sbjct 21660195 CAGACGGAGCACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGC 21660136 Query 21016 GGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTT 21075 | | || |||||||| ||||| || | || || | ||||||||| ||| | ||| | Sbjct 21660135 GACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCT 21660076 Query 21076 CCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGG 21135 ||||||| ||| |||| || || | ||| || |||| |||||| |||| || Sbjct 21660075 CCTTGTCCTGGAT--TTTGCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGG 21660018 Query 21136 TAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 | ||||||||||| || | || || ||||| || ||||| |||| Sbjct 21660017 TGATGGTCTTGCCAGTCAGGGTCTTTACAAAGATCTGCATCTTGA 21659973 Score = 107 bits (118), Expect = 2e-18 Identities = 162/227 (71%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATG-TTATAGTCCGCC 21008 |||||| || | |||||||| || | ||||||||||| || ||| || ||||| | Sbjct 21660880 CCCCTC--AGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCGGAG 21660823 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | || |||||||| ||||| || | || || | ||||||||| ||| Sbjct 21660822 AGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 21660763 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| | ||||||| || || | ||| || |||| |||||| Sbjct 21660762 ATGCCCTCCTTGTCTG-GATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCACCC 21660704 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| |||||||| || || | || || ||||| || ||||| Sbjct 21660703 TCCAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660657 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | |||||||| || | ||||||||||| || ||||| ||||| | | Sbjct 21660425 CCCCTC--AGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGA 21660368 Query 21010 GGGTTTGGGCGTCCT-CCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||| | | || | ||||||||||||| || | || || | ||||||||| ||| Sbjct 21660367 GGGTGCGACCATCTTTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 21660308 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||| ||||||| |||||| || || | ||| || |||| |||||| Sbjct 21660307 ATGCCTCCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACC 21660248 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | || ||| |||||||| || || | || || ||||| || ||||| Sbjct 21660247 T-CAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660202 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/227 (70%), Gaps = 5/227 (2%) Strand=Plus/Minus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | |||||||| || | ||||||||||| || ||||| ||||| | | Sbjct 21660652 CCCCTC--AGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGA 21660595 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 |||| | | || |||||||| ||||| || | || || | |||||||| | ||| | Sbjct 21660594 GGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGT-CTGGGGGA 21660536 Query 21070 CGCCTTCCTTGTCGGCGATCTT-TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 ||| |||||||| |||||| ||| || | ||| || |||| |||||| Sbjct 21660535 TGCCCTCCTTGTCCTGGATCTTGGCCTTTGACATTCTCGATGGTGTCACTGGGCTCAACC 21660476 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | || ||| |||||||| || || | || || ||||| || ||||| Sbjct 21660475 T-CAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660430 >seq7 Length=46052510 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/218 (70%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022 |||||||| ||| | ||||| || || || ||||| ||||| | ||||| || | || Sbjct 22020274 GAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATC 22020215 Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 |||||||| ||||| ||| | || || | ||||||||| ||| | ||| |||||||| Sbjct 22020214 TTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 22020155 Query 21083 --GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATG 21140 ||| ||||| ||||| | | | || || | ||||| || | ||| ||| Sbjct 22020154 CTGGC-ATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATG 22020096 Query 21141 GTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 |||||||| || | || || || || || ||||| || Sbjct 22020095 GTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATCTT 22020058 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022 |||||||| || | |||||||| || || ||||| ||||| | ||||| || | || Sbjct 22020501 GAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATC 22020442 Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 |||||||| ||||| ||| | || || | ||||||||| ||| | ||| |||||||| Sbjct 22020441 TTCCAGCTGCTTGCC-GCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 22020383 Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142 |||||| ||||| | | | || || | ||||| || | ||| ||||| Sbjct 22020382 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGT 22020323 Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||| || | || || || || || ||||| Sbjct 22020322 CTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020290 Score = 82.4 bits (90), Expect = 6e-11 Identities = 133/190 (70%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022 |||||||| ||| | ||||| || || || ||||| ||||| | ||||| || | || Sbjct 22020957 GAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATC 22020898 Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTG-GTCCACGGGCACGCCTTCCTTGT 21081 |||||||| ||||| ||| | || || | |||||| ||| ||| | ||| ||||||| Sbjct 22020897 TTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTGGGGGGATGCCCTCCTTGT 22020838 Query 21082 CGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGG 21141 | |||||| ||||| | | | || || | ||||| || | ||| |||| Sbjct 22020837 CCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGG 22020778 Query 21142 TCTTGCCGGT 21151 ||||||| || Sbjct 22020777 TCTTGCCTGT 22020768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422253955936604