Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq14 125 6e-24 seq7 107 2e-18 >seq14 Length=34043612 Score = 125 bits (138), Expect = 6e-24 Identities = 146/195 (75%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 118545 GACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCG 118604 ||||| || || |||||||| ||| | ||||| ||| || ||||| || || ||| Sbjct 21660169 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCG 21660110 Query 118605 TAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGTTTAAC 118663 |||| ||||||||||| || || || ||||||||||||| ||| | ||||| || || Sbjct 21660109 AAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGA---TTTTGCTTGAC 21660053 Query 118664 CTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTT 118723 | |||| |||||| || ||| ||||| | ||| | || ||||| ||||| || || Sbjct 21660052 ATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTT 21659993 Query 118724 TACAAAAATCTGCAT 118738 |||||| |||||||| Sbjct 21659992 TACAAAGATCTGCAT 21659978 Score = 114 bits (126), Expect = 1e-20 Identities = 156/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTT-GTAATCGCTCATAGTGCGCGTATCCT 118587 ||||| ||| | || ||||| || || ||||| ||| ||| | ||||| ||| | Sbjct 21660866 CACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCGGAGAGGGTGCGACCATCTT 21660807 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | ||||| || || ||| |||| ||||||||||| || || || |||||||||||||||| Sbjct 21660806 CCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTG 21660747 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 || ||| || || | |||| |||||| || ||| |||| | ||| | || | Sbjct 21660746 -GATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCACCCTCCAGGGTGATGGTCT 21660688 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 | || ||||| || || ||||| ||||||||| || Sbjct 21660687 TACCAGTCAGGGTCTTCACAAAGATCTGCATGCCT 21660653 Score = 111 bits (122), Expect = 1e-19 Identities = 156/215 (73%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || ||||| || || |||||||| ||| | ||||| ||| || Sbjct 21660638 CACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTC 21660579 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTG 118647 ||||| || || ||| |||| ||||||||||| || || || ||||||||||||| ||| Sbjct 21660578 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGG-GGGATGCCCTCCTTGTCCTG 21660520 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 | || ||| || | |||| |||||| || ||| ||||| | ||| | || | Sbjct 21660519 GATCTTGGCCTTTGACATTCTCGATGGTGTCACTGGGCTCAACCTC-AGGGTGATGGTCT 21660461 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 | || ||||| || || ||||| ||||||||| || Sbjct 21660460 TACCAGTCAGGGTCTTCACAAAGATCTGCATGCCT 21660426 Score = 100 bits (110), Expect = 2e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCT- 118587 ||||| ||| | || ||||| || || |||||||| ||| | ||||| ||| | Sbjct 21660411 CACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTT 21660352 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | |||||||| || ||| |||| ||||||||||| || || || ||||| ||||||| Sbjct 21660351 CCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCTCCCTTGTCCT 21660292 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 || || || || | |||| |||||| || ||| ||||| | ||| | || | Sbjct 21660291 GGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTC-AGGGTGATGGTCT 21660233 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 | || ||||| || || ||||| ||||||||| Sbjct 21660232 TACCAGTCAGGGTCTTCACAAAGATCTGCATG 21660201 >seq7 Length=46052510 Score = 107 bits (118), Expect = 2e-18 Identities = 151/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || |||||||| || |||||||| ||| | ||||| ||| || Sbjct 22020498 CACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTC 22020439 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || || |||| ||||||||||| || || || |||||||||||||| Sbjct 22020438 CAGCTGCTTGCC-GCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 22020380 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | || | |||||| | ||||||||||| ||| | || || Sbjct 22020379 GATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTT 22020320 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 ||| || || || || || || ||||||||| Sbjct 22020319 GCCTGTGAGGGTCTTCACGAAGATCTGCATG 22020289 Score = 102 bits (112), Expect = 7e-17 Identities = 150/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| || | || || ||||| || |||||||| ||| | ||||| ||| || Sbjct 22020271 CACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTC 22020212 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTG 118647 ||||| || || || |||| ||||||||||| || || || ||||||||||||| ||| Sbjct 22020211 CAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 22020152 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 || || || || | || | |||||| | ||||||||||| ||| | || | Sbjct 22020151 GCATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCT 22020092 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || || || || |||||||| Sbjct 22020091 TGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020061 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/199 (70%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || ||||| || |||||||| ||| ||||| ||| || ||||| || || Sbjct 22020714 GTGGATTCTTTCTGGATGTTGTAGTCGGAAGAGGTGCGGCCATCTTCCAGCTGCTTGCCG 22020655 Query 118602 GCGTAGATGAGACGCTGCTGA-TCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTT 118660 || |||| ||||||||||| || || || |||||||||||||| || || || Sbjct 22020654 GCAAAGATCAGACGCTGCTGGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 22020595 Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | || | |||||| | ||||||||||| ||| | || ||||| || || || Sbjct 22020594 CACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGT 22020535 Query 118721 TTTTACAAAAATCTGCATG 118739 || || || ||||||||| Sbjct 22020534 CTTCACGAAGATCTGCATG 22020516 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| || | || || ||||| || |||||||| ||| | ||||| ||| || Sbjct 22020954 CACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTC 22020895 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTG-ATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||||| || || || |||| ||||||||||| || || || |||||||||||||| Sbjct 22020894 CAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTGGGGGGATGCCCTCCTTGTCCT 22020835 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 || || || || | || | |||||| | ||||||||||| ||| | || | Sbjct 22020834 GGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCT 22020775 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||| || || | | | || || ||||||||| Sbjct 22020774 TGCCTGTGAG-GGTCTCACGAAGATCTGCATG 22020744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433825012233148