Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq19 356 2e-93 seq904 275 4e-69 >seq19 Length=39684913 Score = 356 bits (394), Expect = 2e-93 Identities = 605/870 (70%), Gaps = 14/870 (2%) Strand=Plus/Plus Query 107710 ACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGC 107769 ||||||||||||| | ||| ||||||||||||||||||||||| | |||||| ||||| Sbjct 88689 ACTTCCCCATTGCTTTCTCCATGGTGGTCCATGAGAAGATTGAGATGTTTGAAAGGCTGT 88748 Query 107770 TGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAG 107829 |||| ||| | || | ||||||||| | |||||||| || ||||| ||| | | | Sbjct 88749 TGCGTGCCATCTACACTCCTCAGAACGTCTACTGTGTTCATGTGGACCAGAAAACGTCTG 88808 Query 107830 AGACTTTCAAAGAG-GCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCC 107888 | | ||||| ||| || || | | || | ||||| || |||||||| || || || Sbjct 88809 ATAACTTCAA-GAGTGCAGTAAGTTCTATCGTGTCCTGTTTGCCCAATGTGTTTCTGTCC 88867 Query 107889 AGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGT 107948 |||||| ||| ||||| || || ||||||||||||||||| ||||||||||||||| Sbjct 88868 AGTAAGATGGAGAGTGTGGTCTACGCATCCTGGTCCAGAGTGCAGGCTGACCTGAACTGT 88927 Query 107949 ATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACA 108008 ||||| || |||| || | || | |||| ||| | ||||| || || || ||| Sbjct 88928 ATGGAGGATCTGCTGAAGTCACCTGTCCAGTGGAGATACCTGCTGAACACCTGTGGAACA 88987 Query 108009 GACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAG 108068 ||||||||||| |||||||| || |||||||| | |||||||||| || |||| || ||| Sbjct 88988 GACTTCCCCATTAAGACCAACGCTGAGATGGTTCAGGCCCTCAAGCTGCTGAATGGGAAG 89047 Query 108069 AACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTAT 108128 ||||| |||||||| ||| | ||| | ||| || | ||| | | || | Sbjct 89048 AACAGCATGGAGTCAGAGACGACCAATGACTACAAGAAGGGCAGATGGCAGTTCCATCAC 89107 Query 108129 GAGGTGACAGACACACTGTACCCTACCAGCAAG--ATGAAGGACCCTCCCCCTGATAATT 108186 | || || |||| | || || || | | | | ||| ||| || || | Sbjct 89108 AACGTCACTGACAGAGTGGTCCGGAC--GGAGGTTAAGAAAAGCCCGCCACCAATCAGCA 89165 Query 108187 TACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCT 108246 ||||||||| | || |||||||| ||||||| || | ||||||||||| ||||| Sbjct 89166 CCCCCATGTTCTCTGGCAATGCCTACTTTGTGGTGTCCAGGGCCTTTGTCCATCATGTGA 89225 Query 108247 TAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACG 108306 | || | | ||| |||| | || |||| |||||||| ||||| || || | Sbjct 89226 TGGAGTCTCAGGAGGTCCAGGCACTGCTGGAGTGGGAGAAAGACACTTATAGTCCAGATG 89285 Query 108307 AACACCTCTGGGCCACCCTTCAGCG--TG--CTCCGTGGATGCCTGGCTCTGTTCCTAGC 108362 ||||||| |||||||| || || || || ||||| | || ||||| || | Sbjct 89286 AACACCTGTGGGCCACTCTGCAACGAATGCCCTCCG----TACCAGGCTCCAACCCACCC 89341 Query 108363 CACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTAC 108422 || |||||| | ||||| |||| ||||| |||||| | || |||||| ||| Sbjct 89342 AACAGTAAGTATGAACAGTCAGATATGAACGCCATAGCCAGGTTAGTGAAGTGGTCATAC 89401 Query 108423 CACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGG 108482 | | || ||||| || | || || || || | ||||| ||||| | | |||| Sbjct 89402 CTGGCTGGTGATGTGAGGAGTGGAGCTCCGTACCCTCCCTGTTCTGGGGACTACAGGAGA 89461 Query 108483 GCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTG 108542 || | || | || ||||| || ||||| | ||| | || || | || |||||| | Sbjct 89462 GCTGTGTGTGTCTATGGGGCTGGAGACCTACAGTGGCTCCTAAAGCAACACCACCTCATT 89521 Query 108543 GCAAACAAGTTTGACCCGAGGGTGGATGAT 108572 || |||||||||||||| |||||||||| Sbjct 89522 GCTAACAAGTTTGACCCTGAGGTGGATGAT 89551 Score = 351 bits (388), Expect = 7e-92 Identities = 602/868 (69%), Gaps = 10/868 (1%) Strand=Plus/Plus Query 107710 ACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGC 107769 ||||||||||||| | ||| ||||||||||||||||||||||| | |||||| ||||| Sbjct 908571 ACTTCCCCATTGCTTTCTCCATGGTGGTCCATGAGAAGATTGAGATGTTTGAAAGGCTGT 908630 Query 107770 TGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAG 107829 |||| ||| | || | ||||||||| | |||||||| || ||||| ||| | | | Sbjct 908631 TGCGTGCCATCTACACTCCTCAGAACGTCTACTGTGTTCATGTGGACCAGAAAACATCTG 908690 Query 107830 AGACTTTCAAAGAG-GCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCC 107888 | | ||||| ||| || || | | || | ||||| || |||||||| || || || Sbjct 908691 ATAACTTCAA-GAGTGCAGTAAGTTCTATCGTGTCCTGTTTGCCCAATGTGTTTCTGTCC 908749 Query 107889 AGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGT 107948 |||||| ||| ||||| || || ||||||||||||||||| ||||||||||||||| Sbjct 908750 AGTAAGATGGAGAGTGTGGTCTACGCATCCTGGTCCAGAGTGCAGGCTGACCTGAACTGT 908809 Query 107949 ATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACA 108008 ||||| || |||| || | || | |||| ||| | ||||| || || || ||| Sbjct 908810 ATGGAGGATCTGCTGAAGTCASCTGTCCAGTGGAGATACCTGCTGAACACCTGTGGAACA 908869 Query 108009 GACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAG 108068 ||||||||||| |||||||| || |||||||| | |||||||||| || |||| || ||| Sbjct 908870 GACTTCCCCATTAAGACCAACGCTGAGATGGTTCAGGCCCTCAAGCTGCTGAATGGGAAG 908929 Query 108069 AACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTAT 108128 ||||| |||||||| ||| | ||| | ||| || | ||| | | || | Sbjct 908930 AACAGCATGGAGTCAGAGACGACCAATGACTACAAGAAGGGCAGATGGCAGTTCCATCAC 908989 Query 108129 GAGGTGACAGACACACTGTACCCTACCAGCAAG--ATGAAGGACCCTCCCCCTGATAATT 108186 | || || |||| | || || || | | | | ||| || || || | Sbjct 908990 AACGTCACTGACAGAGTGGTCCGGAC--GGAGGTTAAGAAAAGCCRGCCACCAATCAGCA 909047 Query 108187 TACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCT 108246 ||||||||| | || |||||||| ||||||| || | ||||||||||| ||||| Sbjct 909048 CCCCCATGTTCWCTGGCAATGCCTACTTTGTGGTGTCCAGGGCCTTTGTCCATCATGTGA 909107 Query 108247 TAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACG 108306 | || | | || |||| | || |||| |||||||||||||| || || | Sbjct 909108 TGGAGTCTCAGGAGGTCCGGGCACTGCTGGAGTGGGAGAAAGACACCTATAGTCCAGATG 909167 Query 108307 AACACCTCTGGGCCACCCTTCAGCG--TGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCA 108364 ||||||| |||||||| || || || ||| | || | || ||||| || | | Sbjct 909168 AACACCTGTGGGCCACTCTGCAACGAATGCCCTATG--TACCAGGCTCCAACCCACCCAA 909225 Query 108365 CCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCA 108424 | |||||| | ||||| || | ||||| |||||| | || |||||| |||| Sbjct 909226 CAGTAAGTATGAACAGTCAGATATAAACGCCATAGCCAGGTTAGTGAAGTGGTCATACCT 909285 Query 108425 CGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGC 108484 | || ||||| || | || || || || | ||||| ||||| | | |||| || Sbjct 909286 GGCTGGTGATGTGAGGAGTGGAGCTCCGTACCCTCCCTGTTCTGGGGACTACAGGAGAGC 909345 Query 108485 CATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGC 108544 | || | || ||||| || ||||| | ||| | || || | || |||||| | || Sbjct 909346 TGTGTGTGTCTATGGGGCTGGAGACCTACAGTGGCTCCTAAAGCATCACCACCTCATTGC 909405 Query 108545 AAACAAGTTTGACCCGAGGGTGGATGAT 108572 |||||||||||||| |||||||||| Sbjct 909406 TAACAAGTTTGACCCTGAGGTGGATGAT 909433 Score = 268 bits (296), Expect = 6e-67 Identities = 440/626 (70%), Gaps = 9/626 (1%) Strand=Plus/Plus Query 107710 ACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGC 107769 ||||||||||||| | ||| ||||||||||||||||||||||| | |||||| |||| Sbjct 96342 ACTTCCCCATTGCTTTCTCCATGGTGGTCCATGAGAAGATTGAGATGTTTGAAAGGCTTG 96401 Query 107770 TGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAG 107829 |||| ||| | || | ||||||||| | |||||||| || ||||| ||| | | | Sbjct 96402 TGCGTGCCATCTACACTCCTCAGAACGTCTACTGTGTTCATGTGGACCAGAAAACGTCTG 96461 Query 107830 AGACTTTCAAAGAG-GCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCC 107888 | | ||||| ||| || || | | || | ||||| || |||||||| || | || Sbjct 96462 ATAACTTCAA-GAGTGCAGTAAGTTCTATCGTGTCCTGTTTGCCCAATGTGTTTC-GTCC 96519 Query 107889 AGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGT 107948 |||||| ||| ||||| || || ||||||||||||||||| ||||||||||||||| Sbjct 96520 AGTAAGATGGAGAGTGTGGTCTACGCATCCTGGTCCAGAGTGCAGGCTGACCTGAACTGT 96579 Query 107949 ATGGAAGACTTG-CTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGAC 108007 ||||| || || || || | || | |||| ||| | ||||| || || || || Sbjct 96580 ATGGAGGATCTGTCTGAAGTCACCTGTCCAGTGGAGATACCTGCTGAACACCTGTGGAAC 96639 Query 108008 AGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAA 108067 |||||||||||| |||||||| || |||||||| | |||||||||| || |||| || || Sbjct 96640 AGACTTCCCCATTAAGACCAACGCTGAGATGGTTCAGGCCCTCAAGCTGCTGAATGGGAA 96699 Query 108068 GAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTA 108127 |||||| |||||||| ||| | ||| | ||| || | ||| | | || | Sbjct 96700 GAACAGCATGGAGTCAGAGACGACCAATGACTACAAGAAGGGCAGATGGCAGTTCCATCA 96759 Query 108128 TGAGGTGACAGACACACTGTACCCTACCAGCAAG--ATGAAGGACCCTCCCCCTGATAAT 108185 | || || |||| | || || || | | | | ||| ||| || || | Sbjct 96760 CAACGTCACTGACAGAGTGGTCCGGAC--GGAGGTTAAGAAAAGCCCGCCACCAATCAGC 96817 Query 108186 TTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTC 108245 ||||||||| | || ||||||| ||||||| || | ||||||||||| ||||| Sbjct 96818 ACCCCCATGTTCTCTGGCAATGCCT-CTTTGTGGTGTCCAGGGCCTTTGTCCATCATGTG 96876 Query 108246 TTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGAC 108305 | || | | || |||| | || |||| |||||||||||| | || || Sbjct 96877 ATGGAGTCTCAGGAGGTCCGGGCACTGCTGGAGTGGGAGAAAGACACCTATGGTCCAGAT 96936 Query 108306 GAACACCTCTGGGCCACCCTTCAGCG 108331 |||||||| |||||||| || || || Sbjct 96937 GAACACCTGTGGGCCACTCTGCAACG 96962 >seq904 Length=16254 Score = 275 bits (304), Expect = 4e-69 Identities = 449/634 (71%), Gaps = 17/634 (3%) Strand=Plus/Plus Query 107710 ACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGC 107769 ||||||||||||| | ||| ||||||||||||||||| ||||| | |||||| ||||| Sbjct 9275 ACTTCCCCATTGCTTTCTCCATGGTGGTCCATGAGAACATTGAGATGTTTGAAAGGCTGT 9334 Query 107770 TGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAG 107829 |||| ||| | || | ||||||||| | |||||||| || ||||| ||| | | | Sbjct 9335 TGCGTGCCATCTACACTCCTCAGAACGTCTACTGTGTTCATGTGGACCAGAAAACATCTG 9394 Query 107830 AGACTTTCAAAGAG-GCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCC 107888 | | ||||| ||| || || | | || | ||||| || |||||||| || || || Sbjct 9395 ATAACTTCAA-GAGTGCAGTAAGTTCTATCGTGTCCTGTTTGCCCAATGTGTTTCTGTCC 9453 Query 107889 AGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGT 107948 |||||| ||| ||||| || || ||||||||||||||||| ||||||||||||||| Sbjct 9454 AGTAAGATGGAGAGTGTGGTCTACGCATCCTGGTCCAGAGTGCAGGCTGACCTGAACTGT 9513 Query 107949 ATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACA 108008 ||||| || |||| || | || | |||| ||| | ||||| || || || ||| Sbjct 9514 ATGGAGGATCTGCTGAAGTCASCTGTCCAGTGGAGATACCTGCTGAACACCTGTGGAACA 9573 Query 108009 GACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAG 108068 ||||||||||| |||||||| || |||||||| | |||||||||| || |||| || ||| Sbjct 9574 GACTTCCCCATTAAGACCAACGCTGAGATGGTTCAGGCCCTCAAGCTGCTGAATGGGAAG 9633 Query 108069 AACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTAT 108128 ||||| |||||||| ||| | ||| | ||| || | ||| | | || | Sbjct 9634 AACAGCATGGAGTCAGAGACGACCAATGACTACAAGAAGGGCAGATGGCAGTTCCATCAC 9693 Query 108129 GAGGTGACAGACACACTGTACCCTAC-CAG--CAAGATGAAG--GA-CCCTCCCCCTGAT 108182 | || || |||| | || || || || |||| ||| || ||| || || || Sbjct 9694 AACGTCACTGACAGAGTGGTCCGGACGGAGGTTAAGA-AAAGCCGAGCCCGCCACCCAAT 9752 Query 108183 AATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACAT 108242 | ||||||||||| || |||| ||| ||||||| || | ||||||||||| ||| Sbjct 9753 CAGCACCCCATGTTCACTGGCAATGGCTACTTTGTGGTGTCCAGGGCCTTTGTCCATCAT 9812 Query 108243 GTCTTAGACAACCC--TAAATCC-CAAAGACTGGTTGAATGGGTCAAAGACACCT--ATA 108297 || | | | | | ||| | |||| | || |||| |||||||||| ||| Sbjct 9813 GTGATGGGAGTCTCAGGAGGTCCGCGGCCACTGCTGGAGTGGGAGAAAGACACCTACATA 9872 Query 108298 GCCC---CGACGAACACCTCTGGGCCACCCTTCA 108328 | || || |||||||| |||||||| || || Sbjct 9873 GTCCAGATGATGAACACCTGTGGGCCACTCTGCA 9906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348264474828006