Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq14 132 4e-26 seq7 100 2e-16 >seq14 Length=34043612 Score = 132 bits (146), Expect = 4e-26 Identities = 159/214 (74%), Gaps = 3/214 (1%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCT-CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 |||| ||| || ||| ||||||||| |||||||||||| || |||| | || || Sbjct 21660185 ACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTC 21660126 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 ||| || || |||||||| |||| ||||| ||||| || || | |||||||||||| Sbjct 21660125 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 21660066 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 | |||||||| || | | | | |||| | ||| ||||||| ||| || ||||| Sbjct 21660065 GA--TTTTGCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTT 21660008 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 ||| ||||| ||||| |||||||| ||||| ||| Sbjct 21660007 GCCAGTCAGGGTCTTTACAAAGATCTGCATCTTG 21659974 Score = 122 bits (134), Expect = 7e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTT-GTAGTCGTTCAGTTGGCGATCGTCGTC 45186 |||| ||| || ||| ||||||||| ||||| ||||||| || |||| | || || Sbjct 21660865 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCGGAGAGGGTGCGACCATCTTC 21660806 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 ||| || || |||||||| |||| ||||| ||||| || || | ||||||||||| | Sbjct 21660805 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTG- 21660747 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 || ||| ||| || | | | | |||| | ||| |||||| ||| || ||||| Sbjct 21660746 GATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCACCCTCCAGGGTGATGGTCTT 21660687 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| |||||||||||||| |||||| Sbjct 21660686 ACCAGTCAGGGTCTTCACAAAGATCTGCATG 21660656 Score = 114 bits (126), Expect = 1e-20 Identities = 159/219 (73%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGT-C 45186 |||| ||| || ||| ||||||||| |||||||||||| || |||| | || | | Sbjct 21660410 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTTC 21660351 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 ||| ||||| |||||||| |||| ||||| ||||| || || | || |||||||| Sbjct 21660350 CAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCTCCCTTGTCCTG 21660291 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 || || ||| || | | | | |||| | ||| ||||| | ||| || ||||| Sbjct 21660290 GATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTC-AGGGTGATGGTCTT 21660232 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCTCA 45345 || ||||| |||||||||||||| |||||| | ||||| Sbjct 21660231 ACCAGTCAGGGTCTTCACAAAGATCTGCATGCT-CCTCA 21660194 Score = 113 bits (124), Expect = 4e-20 Identities = 154/211 (73%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| ||||||||| |||||||||||| || |||| | || ||| Sbjct 21660637 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTCC 21660578 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| ||||| || || | |||||||||||| Sbjct 21660577 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGG-GGGATGCCCTCCTTGTCCTGG 21660519 Query 45248 ATTTTTTGC-TTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 || || | || || | | | | |||| | ||| |||| || ||| || ||||| Sbjct 21660518 ATCTTGGCCTTTGACATTCTCGATGGTGTCACTGGGCTCAACCT-CAGGGTGATGGTCTT 21660460 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| |||||||||||||| |||||| Sbjct 21660459 ACCAGTCAGGGTCTTCACAAAGATCTGCATG 21660429 >seq7 Length=46052510 Score = 100 bits (110), Expect = 2e-16 Identities = 149/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| ||| ||||| |||||||||||| || ||| | || ||| Sbjct 22020497 ACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCC 22020438 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| ||||| ||||| || || | |||||||||||| Sbjct 22020437 AGCTGCTTGCC-GCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 22020379 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | |||| | ||| ||||| | ||| || |||||| Sbjct 22020378 ATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTG 22020319 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || |||||||| ||||| |||||| Sbjct 22020318 CCTGTGAGGGTCTTCACGAAGATCTGCATG 22020289 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || || ||| || ||||| |||||||||||| || ||| | || ||| Sbjct 22020270 ACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCC 22020211 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC-GC 45246 || || || ||||| || |||| ||||| ||||| || || | |||||||||||| | Sbjct 22020210 AGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 22020151 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 || || ||| || | | | | |||| | ||| ||||| | ||| || ||||| Sbjct 22020150 CATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTT 22020091 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 ||| || || |||||||| ||||| ||||| || Sbjct 22020090 GCCTGTGAGGGTCTTCACGAAGATCTGCATCTT 22020058 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/194 (71%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 || ||||| ||||||||||| | || | ||| | || ||||| || || ||||| || Sbjct 22020708 TCTTTCTGGATGTTGTAGTCGGAAGAGGT-GCGGCCATCTTCCAGCTGCTTGCCGGCAAA 22020650 Query 45205 TATCAACCGCTG-TTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCG 45263 |||| ||||| | |||| || || | |||||||||||| || || ||| || Sbjct 22020649 GATCAGACGCTGCTGGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACAT 22020590 Query 45264 CCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323 | | | | |||| | ||| ||||| | ||| || |||||||| || || ||||||| Sbjct 22020589 TCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCA 22020530 Query 45324 CAAAGATTTGCATG 45337 | ||||| |||||| Sbjct 22020529 CGAAGATCTGCATG 22020516 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || || ||| || ||||| |||||||||||| || ||| | || ||| Sbjct 22020953 ACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCC 22020894 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTG-GTCGGGAGGCACACCCTCCTTGTCCGC 45246 || || || ||||| || |||| ||||| || ||| || || | |||||||||||| Sbjct 22020893 AGCTGCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTGGGGGGATGCCCTCCTTGTCCTG 22020834 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 || || ||| || | | | | |||| | ||| ||||| | ||| || ||||| Sbjct 22020833 GATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTT 22020774 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||| || || ||| |||| ||||| |||||| Sbjct 22020773 GCCTGTGAGGGTC-TCACGAAGATCTGCATG 22020744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395070293536399